Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00807 ATGAACAAAGAGTTTAACAGCATTGTGAAGGTTTGGGAAGCAGCAGTTAGGAAATCAGCTGGACCAAAGAAAAGGGCCAACAGAATCTTCACAACACCAATGTCTGTTGCCCATGTTGACGATGATGTTTACCAGGTTGAGAAGATTCTCAGCAATGGTGATTTCTATACAGGTCAATGGCTGAACAGTTTTCCAAATGGTCAAGGTAAGTATCTATGGACAGATGGTTGTATGTATGTAGGTGAATGGCAAAAGGGTAATATCATAGGTAAAGGTAGGTTTAGTTGGCCTAGTGGTGCTACCTATGAAGGTGATTTCAAAAATGGTTTTATGGATGGTAAAGGTACTTATATAGGTTCTAATGGTGATACTTATAAAGGTTTTTGGGTTATGGATATGAGAAATGGACAAGGGACACAGAGTTATTGTAATGGTGATTTCTATGATGGTGAATGGAAGAAGGGGTTGCAAAATGGACATGGGAGGTATCAATGGAAGAATGGGAATAATTACATTGGTCAATGGATGAATGGTTTGTGTAATGGAAATGGTACTTTGATGTGGCAAAATGGGAATAGATATGATGGTTGTTGGGAAGATGGTTTTCCTAAGGGAAACGGTACGTTTCGATGGTGTGATGGTAGTTTTTTTGCAGGTATTTGGAGTAAAGATGGGAATGAACAAACTGGTACTTATTATCCTTCTTCTGATGATGATCCTTCTGATGATAATCCTCCCGATTGGAAACCGATGGACCTTTTTACGGTTGATTTGCTTGATTCTTCTGTTTGTACTTTAGAGAAAGTTTCCATTTTTCCTTCGCAGAAGAATTTGAACATGTTTGGCTTAGAGGAAGATAGTAGTAATAAAAAGTTGTCATCCAGGAAAGTTTTTGATGCTAATGGAAAGCCTAAGTGGAATTTAGGAGATGAAAGGATGAGTAATTATAGTTCTGAAGATGGTTCTTATAGTAGTTATGATGGATCAAGGAGTCCTATGATTGATCATTCCATTCCACGAGTTCCGAATTTGAGATTAAAGCCTCCTAAGAGACAAGGAGAGACTATTTCCAAAGGACATAAGAACTATGAACTCATGCTTAATTTGCAGCTAGGTATCAGACATGCTGTTGGAAGACCTGCTCCAAGTACATCTCTTGATTTGAAGTCTTCTGCGTTCGATCCGAAAGAAAAAGTATGGACCAAGTTTCCACCGGAAGGATCGAAGCACACACCACCTCACCCGTCTTGCGAGTTTCGATGGAAAGACTATTGCCCAGTTGTGTTCAGGGCTCTAAGAAAATTGTTCAAAGTAGATCCAGCCGATTACATGATATCGTTATGTGGAAATGACGCACTTCGAGAGCTCTCGTCCCCGGGAAAAAGTGGAAGCTTTTTTTATTTGACCAACGATGATCGATACATGATAAAAACCATGAAGAAATCAGAAGTAAAAGTTTTTCTACGAATGCTTCCCGGTTACTACAAACACGTTCGAGCATTCGAGAACACTCTAGTCACCAAGTTCTTCGGCCTACATTGCGTTAAATTACCAGGAGCTTCACAGAAAAAGGTTCGTTTCGTCATCATGGGAAACCTATTTTGTTCGCAATACGCCATTCACAGACGTTTTGACTTGAAAGGTTCAACGTTTGGTCGTACAACTGATAAAGCCGAGGATGAAATAGAGCCTACAACGACGCTCAAGGATCTGGACTTAAATTATATATTCCGGCTGCGAAAGGCTTGGTTTCAAGAATTCCACAGGCAAGTGGATAGAGATTGTGACTTTCTCGAACAAGAAAGAATCATGGATTACAGTATGTTGGTAGGTCTTCATTTTCGAGGATTGTCGTGTACTAGTGAAGCCGGTACACCTTCTCGCAATTCTGGCGCTCACACTCCAACCGGTAACTTCGATGATGGAGCTCCCCGTCTTTCAGGCGTAGACATGGATCGTATTGTGATCGATCCTAGCCGGTGGATTCAGTTAGGTATAAACATGCCAGCACGAGCCGAAATGACGACGCGGAAAAGTTGCGACACGCCTCAGTTGGTTGGAGAACCAACAGGGGACACATACGAAATCATAATCTTTTTCGGTATAATAGACATATTACAAGACTATGATATTAGTAAAAAGCTTGAGCATGCTTACAAATCATTCCAATACGACGCAACCACGATCTCGGCCGTTGATCCAAGGTTATACTCGAGACGGTTTCGCGAATTCATCTTCAGAGTTTTTGTAGAAGACACTTCTTGA 2265 0.4088 MNKEFNSIVKVWEAAVRKSAGPKKRANRIFTTPMSVAHVDDDVYQVEKILSNGDFYTGQWLNSFPNGQGKYLWTDGCMYVGEWQKGNIIGKGRFSWPSGATYEGDFKNGFMDGKGTYIGSNGDTYKGFWVMDMRNGQGTQSYCNGDFYDGEWKKGLQNGHGRYQWKNGNNYIGQWMNGLCNGNGTLMWQNGNRYDGCWEDGFPKGNGTFRWCDGSFFAGIWSKDGNEQTGTYYPSSDDDPSDDNPPDWKPMDLFTVDLLDSSVCTLEKVSIFPSQKNLNMFGLEEDSSNKKLSSRKVFDANGKPKWNLGDERMSNYSSEDGSYSSYDGSRSPMIDHSIPRVPNLRLKPPKRQGETISKGHKNYELMLNLQLGIRHAVGRPAPSTSLDLKSSAFDPKEKVWTKFPPEGSKHTPPHPSCEFRWKDYCPVVFRALRKLFKVDPADYMISLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVFLRMLPGYYKHVRAFENTLVTKFFGLHCVKLPGASQKKVRFVIMGNLFCSQYAIHRRFDLKGSTFGRTTDKAEDEIEPTTTLKDLDLNYIFRLRKAWFQEFHRQVDRDCDFLEQERIMDYSMLVGLHFRGLSCTSEAGTPSRNSGAHTPTGNFDDGAPRLSGVDMDRIVIDPSRWIQLGINMPARAEMTTRKSCDTPQLVGEPTGDTYEIIIFFGIIDILQDYDISKKLEHAYKSFQYDATTISAVDPRLYSRRFREFIFRVFVEDTS 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00807 754 SMART PIPK_2 389 750 IPR002498 GO:0016307|GO:0046488
Vifa4g00807 754 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 144 237 - -
Vifa4g00807 754 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 348 532 IPR027484 -
Vifa4g00807 754 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 355 749 IPR002498 GO:0016307|GO:0046488
Vifa4g00807 754 FunFam Phosphatidylinositol 4-phosphate 5-kinase 348 532 - -
Vifa4g00807 754 PIRSF PIP5K_plant 2 753 IPR017163 GO:0005524|GO:0016308
Vifa4g00807 754 CDD PIPKc_AtPIP5K_like 362 748 - -
Vifa4g00807 754 Gene3D - 533 749 - -
Vifa4g00807 754 Pfam MORN repeat 194 215 IPR003409 -
Vifa4g00807 754 Pfam MORN repeat 79 100 IPR003409 -
Vifa4g00807 754 Pfam MORN repeat 171 193 IPR003409 -
Vifa4g00807 754 Pfam MORN repeat 102 124 IPR003409 -
Vifa4g00807 754 Pfam MORN repeat 125 146 IPR003409 -
Vifa4g00807 754 Pfam MORN repeat 148 169 IPR003409 -
Vifa4g00807 754 Pfam MORN repeat 56 78 IPR003409 -
Vifa4g00807 754 Gene3D - 178 240 - -
Vifa4g00807 754 Gene3D - 45 85 - -
Vifa4g00807 754 Gene3D - 86 130 - -
Vifa4g00807 754 Gene3D - 131 177 - -
Vifa4g00807 754 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 448 747 IPR002498 GO:0016307|GO:0046488
Vifa4g00807 754 MobiDBLite consensus disorder prediction 311 331 - -
Vifa4g00807 754 MobiDBLite consensus disorder prediction 228 249 - -
Vifa4g00807 754 SMART morn 54 75 IPR003409 -
Vifa4g00807 754 SMART morn 77 98 IPR003409 -
Vifa4g00807 754 SMART morn 123 144 IPR003409 -
Vifa4g00807 754 SMART morn 100 121 IPR003409 -
Vifa4g00807 754 SMART morn 192 213 IPR003409 -
Vifa4g00807 754 SMART morn 146 167 IPR003409 -
Vifa4g00807 754 SMART morn 169 190 IPR003409 -
Vifa4g00807 754 SUPERFAMILY SAICAR synthase-like 358 749 - -
Vifa4g00807 754 MobiDBLite consensus disorder prediction 309 342 - -
Vifa4g00807 754 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 51 155 - -
Vifa4g00807 754 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 65 750 IPR023610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00807 Vifa-Chr4 239928408 239931765 Dispersed/Wgd