Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00801 ATGAAAATCCCAATTTTTCTAACCCCTCTATTTCTGTGTCTCTTCATCTCCCTAGTCCAAGGACAAACACAAAATCCAAAATGTGACATCCAAGATCATGGCTCAACCCTCAAAGTATTCCATGTCTTCAGCCAATGTTCACCCTTCAAACCATCAAAGCCAATGTCATGGGAAGAAAGTGTCCTACAGCTACAAGCCAAGGACCAAACAAGGATGCAATACTTGTCTAGCTTAGTTGCTGGGAGATCGGTTGTTCCGGTTGCATCGGCGAGACAGATCATACAAAGTCCGACATATATTGTGAAAGCTAAGATTGGTACTCCTCCTCAAACTTTGCTTTTGGCTTTGGATACTAGTAATGATGCTGCTTGGATTCCTTGTACTGCTTGTCTTGGTTGCTCAACTTCAAAACCTTTTGCTCCTGCTAAGTCTACCACGTTTAAGAATGTTGGATGCGGTTCTACTCAATGCAGACAGGTACCCAACCCCACTTGCGGTGGAAGCGCGTGTGCATTCAATTTCACCTATGGTAGTTCCACCATAGCAGCTAGTGTGGTCCAAGACACACTTACCCTAGCTACTGACCCAATTCCAAGCTATACTTTTGGCTGTGTTCAAAAAACAACTGGGAGTTCAGCACCACCACAGGGTTTATTGGGCTTGGGCCGTGGCCCATTGTCACTCTTGGCCCAAACACAAAATCTATACCAATCGACATTCTCTTATTGTTTGCCGAGCTTTAAATCGGCTAACTTTAGTGGGTCATTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATTAGGTTTACACCACTTCTAAGAAATCCTCGAAGATCTTCACTCTATTATGTTAATTTGGTTGCTATTAAAGTCGGTCGAAGAATCGTCGATATCCCTCCAACAGCATTGGCCTTCAACCCTACCACCGGTGCAGGCACCATATTTGACTCTGGTACGGTGTTCACTCGACTAGTTGAACCGGTTTATACTGCAGTAAGAAACGAGTTCCGCCGGCGAGTTGGTCCGAAGCTCATCGTGACAACCCTAGGAGGGTTTGACACATGCTACAATGTCCCAATAGTTGCACCAAATATTACATTCATGTTCTCCGGATTGAATGTAACACTACCACCTGACAACACCCTCATACACAGCACTGCCGGTAGTACCACATGTTTGGCCATGGCGGCTGCGCCGGATAATGTGAACTCGGTGTTGAATGTGATAGCCAACATGCAACAGCAGAACCACCGTGTGCTATTTGATGTGCCCAACTCAAGACTTGGTGTTGCTCGTGAAGTTTGCACTTAA 1311 0.4592 MKIPIFLTPLFLCLFISLVQGQTQNPKCDIQDHGSTLKVFHVFSQCSPFKPSKPMSWEESVLQLQAKDQTRMQYLSSLVAGRSVVPVASARQIIQSPTYIVKAKIGTPPQTLLLALDTSNDAAWIPCTACLGCSTSKPFAPAKSTTFKNVGCGSTQCRQVPNPTCGGSACAFNFTYGSSTIAASVVQDTLTLATDPIPSYTFGCVQKTTGSSAPPQGLLGLGRGPLSLLAQTQNLYQSTFSYCLPSFKSANFSGSLRLGPVAQPKRIRFTPLLRNPRRSSLYYVNLVAIKVGRRIVDIPPTALAFNPTTGAGTIFDSGTVFTRLVEPVYTAVRNEFRRRVGPKLIVTTLGGFDTCYNVPIVAPNITFMFSGLNVTLPPDNTLIHSTAGSTTCLAMAAAPDNVNSVLNVIANMQQQNHRVLFDVPNSRLGVAREVCT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00801 436 FunFam Aspartyl protease AED3 260 436 - -
Vifa4g00801 436 Gene3D Acid Proteases 260 436 IPR021109 -
Vifa4g00801 436 ProSiteProfiles Peptidase family A1 domain profile. 99 431 IPR033121 -
Vifa4g00801 436 Pfam Xylanase inhibitor N-terminal 99 259 IPR032861 -
Vifa4g00801 436 Pfam Xylanase inhibitor C-terminal 282 429 IPR032799 -
Vifa4g00801 436 Gene3D Acid Proteases 75 259 IPR021109 -
Vifa4g00801 436 PANTHER ASPARTYL PROTEASES 11 429 IPR001461 GO:0004190|GO:0006508
Vifa4g00801 436 FunFam aspartyl protease AED3 77 259 - -
Vifa4g00801 436 SUPERFAMILY Acid proteases 97 435 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00801 Vifa-Chr4 236769385 236770953 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00801 4 236769385 236770953 Vifa4g00801 4 236769385 236770953 ECH