Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00798 ATGTCTGATTTGGTTGCTCGTACGGGTCGGCATCAGCAACGGTATAAGGACGGTTATCGTCTTGTTGCTGGGTGTGTTCCCTTTAGGTATAAAAGTTGTGACGACGACTCTAGTTCTGAGAAGATTGTTGAAGTGCTTCTGATTAATTCACCTAGTGGGCCAGGTCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGATGAAACTGTTGAAGAGGCTGCTGTAAGAGAAGCTATAGAAGAAGCAGGAGTTCGTGGAGATCTAATGGAATGTCTTGGGTGCTATGAATTTAGGAGTAAGACCCACCAAGATGAGTTCAGTCCAGAAGGGTTGTGTAAAGCAGCAATGTTCGCTTTGTTTGTCAAGGAGGAACTTGAGCTGTGGCCTGAGCAAGATACCAGAAATAGGAGTTGGTTGACTGTATCAGAGGCACTTGGAAGCCTTCGGCATGCGTGGATGAGGGACGCTCTGGAACGCTTCTGCAAATGGCACGAGGAAAAGTTTGTGGGTTGA 510 0.4667 MSDLVARTGRHQQRYKDGYRLVAGCVPFRYKSCDDDSSSEKIVEVLLINSPSGPGLLFPKGGWENDETVEEAAVREAIEEAGVRGDLMECLGCYEFRSKTHQDEFSPEGLCKAAMFALFVKEELELWPEQDTRNRSWLTVSEALGSLRHAWMRDALERFCKWHEEKFVG 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00798 169 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Vifa4g00798 169 CDD Nudix_Hydrolase_9 21 153 IPR047198 GO:0016462
Vifa4g00798 169 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 161 - -
Vifa4g00798 169 Pfam NUDIX domain 44 159 IPR000086 -
Vifa4g00798 169 ProSiteProfiles Nudix hydrolase domain profile. 18 160 IPR000086 -
Vifa4g00798 169 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 162 - -
Vifa4g00798 169 SUPERFAMILY Nudix 10 163 IPR015797 -
Vifa4g00798 169 FunFam Nudix hydrolase 16, mitochondrial 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00798 Vifa-Chr4 235185768 235189762 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00798 4 235185768 235189762 Vifa4g00798 4 235185768 235189762 ECH