Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00532 ATGGCTTCCTCACCTCCTTCATTCTCTCCTTCTCGCACTACTTGTGCTTCTCTCCTCCGTCAATTGCAGATGATATGGGATGAGATTGGGGAGAGTGACACTGAAAGAGACAATATGCTGCTTCAACTGGAGCAAGAGTGCCTTGACATTTATCACAGAAAGGTTGAGAAAACCAGAAAGCACAAAGCTGACTTGAATAAGTTGCTGGATGATGCTGAATCTGAAGTCAGCAGTATTGCTTCTTCTTTTGGGGATTGCTTGTCGTTCTCACGGGGAAAGGGAACTCTGAAGCAGCAATTAGCCAACATCAGACCTGTCTTAGAGGACTTAAGGTCAAAGAAGGATGAGAGAGTCAAGGAATTTTTAAAAATTAAGTCCCAAATTTCTCAGATATGTGCTGAAATAGCAGGCTCTGGACAGTCCAAAGATGTCACAGATCAAGATCTTGATCAACGTGATCTGACAACAAAGAAATTGGGGGAACTCAAATTGCATCTCGATGAACTGCAAAATGAAAAGATATTGCGCCAGCTGAAAGTGAAGAATCATATCACTATTATTAGCGAGCTTTCAACAGTAATGTCAATTGATTTTAAGAAGACTTTAAATGGCGTTCACCCAAGCTTGAGCGATTCATCAAATGGTGCACCGCTAAGCATTAGCAACGACACTCTTGCTGCATTAACTGGGGTTGTTCATTCATTAAAGCAGGAAAAACAACAAAGGCTACAAAAGGTACAAGAACTTACTAAGTTCTTGGTAGAGTTATGGGATCTTATGGAGATGCCAATTGATGAGCAAAAAGCATTTAGCCATGTTACTAGATTAATTTCAGCATCAGTTGACGAAGTGTCAATCCGAGGATGCCTCTCTGCTGATGTCATTAAGCAGGTTGAGGTTGAAGTTCAGCGCTTAAATGTTTTGAAAGCTAGTAAGATGAAGGAATTAGTGTTTAAAAGACAGAATGAACTTGAAGAAATTTACAGAGGAGTTCATATGGATGTGGATAGTGAAGCGGCTAGAAAGATTCTCACCAGCCGCATAGAATCTGGTAATATCGATATGTCTGAATTGCTTCAAAGCATGGATGATCAAATCAGAATGGCCAAAGAGCAAGCTCTAAGCAGAAGAGATATCTTAGATAGGGTGGAGAAATGGAAATTTGCAGCTGAGGAGGAAAAGTGGTTAGATGAATATGAAAAGGATGAAAATCGATATAGCGCAGTAAGAGGAGCACATAAAAATTTGAAGCGGGCAGAGAAAGCACGGATTCTTGTCAGCAAGATTCAATCTATGGTAGAGAACTTGACTGCAAAAGTGAAAGCATGGGAGACGGAAAAAGGAATTCCTTTCTTATATGAAAAGGCTCCGTTGCTGCAAAGCTTGGACGAATACAATGTACAGCAGCAATTGAGAGAAGAAGAGAAGCGGAAATCTCGGGAGCAGAAGCGGCTTAGTGAACAACTTTCTGTAGAGCAAGAAGCAATGTTTGGTTCAAAATCTGCAACAAAGAAGCCTCTAAGCCAGAGTACTCATGCTAACACCATAGCTGGGACACCAACTGGGCGCCGAGTGCAAACACCTTCAAGCCGTTATGGAACCTCGGGTGCAAAGGATCGTAGAGAAAGTGGCAGAATGAATAACATAATTCCAGTTAACTATGTTGCTCTTCCGAAAGACGACTCTGCTTCAAGGGGCAGTTAA 1704 0.4155 MASSPPSFSPSRTTCASLLRQLQMIWDEIGESDTERDNMLLQLEQECLDIYHRKVEKTRKHKADLNKLLDDAESEVSSIASSFGDCLSFSRGKGTLKQQLANIRPVLEDLRSKKDERVKEFLKIKSQISQICAEIAGSGQSKDVTDQDLDQRDLTTKKLGELKLHLDELQNEKILRQLKVKNHITIISELSTVMSIDFKKTLNGVHPSLSDSSNGAPLSISNDTLAALTGVVHSLKQEKQQRLQKVQELTKFLVELWDLMEMPIDEQKAFSHVTRLISASVDEVSIRGCLSADVIKQVEVEVQRLNVLKASKMKELVFKRQNELEEIYRGVHMDVDSEAARKILTSRIESGNIDMSELLQSMDDQIRMAKEQALSRRDILDRVEKWKFAAEEEKWLDEYEKDENRYSAVRGAHKNLKRAEKARILVSKIQSMVENLTAKVKAWETEKGIPFLYEKAPLLQSLDEYNVQQQLREEEKRKSREQKRLSEQLSVEQEAMFGSKSATKKPLSQSTHANTIAGTPTGRRVQTPSSRYGTSGAKDRRESGRMNNIIPVNYVALPKDDSASRGS 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00532 567 MobiDBLite consensus disorder prediction 473 547 - -
Vifa4g00532 567 MobiDBLite consensus disorder prediction 473 488 - -
Vifa4g00532 567 MobiDBLite consensus disorder prediction 492 534 - -
Vifa4g00532 567 Coils Coil 55 75 - -
Vifa4g00532 567 Coils Coil 468 488 - -
Vifa4g00532 567 Coils Coil 152 172 - -
Vifa4g00532 567 Gene3D - 367 499 - -
Vifa4g00532 567 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 563 IPR007145 GO:0000226|GO:0008017
Vifa4g00532 567 Coils Coil 426 446 - -
Vifa4g00532 567 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00532 Vifa-Chr4 147285407 147294202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00532 13 533 EF-hand Containing Proteins AT5G62250 36.929 4.27e-94 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00532 4 147285407 147294202 Vifa4g00532 4 147285407 147294202 ECH