Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00480 ATGTTGGAGTTACCATTCAACATGACACTTAATTTCCCTACATTGTTTTTCAAATCTTTACCATTTGCTAAGAATTTGGAGCCTGAATTGTTGAATGGCGCAATTGCTCTTGTTGCTGTTGGTCTTACTGCTGCTTATATTTACTATCGCAAGAAACCCAAAGGTTCCCTAGACCCAAATAATTTCAAAGAATTCAAACTTGTAAAGAAGACCCAGATCAGCCCCAATGCTGCAAGATTCAAATTTGCCCTTCCTACTCCTAAATCCATATTAGGTCTTCCGGTTGGAAAAAACATACTTGTCAGAGGAAGAGATAGTGAAGGAGAGGAAGTTATGAGGTCATATACTCCAATCACATTGGATTCAGATATTGGTTATTTTGAATTAGTTATAAAGATGTACCCAAATGGAAAAATGTCACACCATTTTAGGCAAATGAAGAAAGGTGACAGCTTGGCAGTGAAGGGGCCCAAGGGACGTTTCAGTTACAAAGTTGGTCAGGTTAGGGCATTTGGAATGATTGCCGGAGGTTCAGGCATTACCCCAATGTTTCAGCTTATCAGGGCCATACTAGAAAACAAAAAGGACAAAACACAAGTGTACCTCATTTATGCAAATGTGACAGTGGATGATATCCTACTAAAGGAAGAACTTGATCGCTTTGCAAACACATTTCCTCACAGATTCCACGTCTATCATGTTCTTAACAAGCCTCCTAATGAATGGAATGGTGGCGTTGGGTATATATTGAAGGAGATGATTGAATCCCATTGTCCAGCACCTGCCTCGGATATCCAGATACTTAGGTGTGGTCCACCACCCATGAATAAAGCCATAGCAACTCATCTTGCTGCACTTGGATACACATCAAACATGCAGTTTGAGTTCTAA 891 0.4018 MLELPFNMTLNFPTLFFKSLPFAKNLEPELLNGAIALVAVGLTAAYIYYRKKPKGSLDPNNFKEFKLVKKTQISPNAARFKFALPTPKSILGLPVGKNILVRGRDSEGEEVMRSYTPITLDSDIGYFELVIKMYPNGKMSHHFRQMKKGDSLAVKGPKGRFSYKVGQVRAFGMIAGGSGITPMFQLIRAILENKKDKTQVYLIYANVTVDDILLKEELDRFANTFPHRFHVYHVLNKPPNEWNGGVGYILKEMIESHCPAPASDIQILRCGPPPMNKAIATHLAALGYTSNMQFEF 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00480 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 172 191 IPR001709 GO:0016491
Vifa4g00480 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 210 221 IPR001709 GO:0016491
Vifa4g00480 296 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 266 274 IPR001709 GO:0016491
Vifa4g00480 296 Gene3D - 157 293 IPR039261 -
Vifa4g00480 296 PANTHER NADH-CYTOCHROME B5 REDUCTASE 52 296 IPR001834 GO:0016491
Vifa4g00480 296 FunFam NADH-cytochrome b5 reductase 154 296 - -
Vifa4g00480 296 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 60 164 IPR017927 GO:0016491
Vifa4g00480 296 SUPERFAMILY Riboflavin synthase domain-like 56 163 IPR017938 -
Vifa4g00480 296 Gene3D Translation factors 55 156 - -
Vifa4g00480 296 PRINTS Cytochrome B5 reductase signature 91 102 - -
Vifa4g00480 296 PRINTS Cytochrome B5 reductase signature 210 221 - -
Vifa4g00480 296 PRINTS Cytochrome B5 reductase signature 172 191 - -
Vifa4g00480 296 PRINTS Cytochrome B5 reductase signature 113 120 - -
Vifa4g00480 296 PRINTS Cytochrome B5 reductase signature 266 274 - -
Vifa4g00480 296 PRINTS Cytochrome B5 reductase signature 149 163 - -
Vifa4g00480 296 FunFam NADH-cytochrome b5 reductase 55 154 - -
Vifa4g00480 296 Pfam Oxidoreductase NAD-binding domain 173 280 IPR001433 GO:0016491
Vifa4g00480 296 CDD cyt_b5_reduct_like 65 296 - -
Vifa4g00480 296 Pfam Oxidoreductase FAD-binding domain 65 163 IPR008333 -
Vifa4g00480 296 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 152 291 IPR039261 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00480 Vifa-Chr4 134191749 134193684 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00480 46 296 NADPH P450 reductases AT5G17770 66.534 2.05e-129 367