Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00472 ATGAACGCATCTATCATCGATCCGTTGCAGGGAGATTTCCCTGAAGTGATAGAGGAGTATCTGGAACTGGAACATGGGATTATGAAATGTATTGCTTTCAACCGTCGTGGTACCCTTCTTGCTGCTGGCTGCAATGATGGAAGTTGTGTTATTTGGGATTTTTTAACCAGGGGTGTTGCTAAAGAGCTTCGAGACAGTGAATGTTCTTCTCCCATTACCAGTATTTGTTGGTCAAAGTGTGGTAATCGAATTCTTGTATCTGCTGCTGACAAGTCGTTATCCCTGTGGGATGTTTTGAGTGGTAAGAGGATAAGAAGAATAGTTTTACAGCAAACCCCTTTACAAGCTCGTCTTCATCCAGGGTCCTCCAAACTCTGCTTGGCGTGTCCTCTCTCATGTACTCCGATGATTATTGACTTAAACACTGAAGATACAACTTTTCTTAAAGTTTCTGTCTCTGAGAAACCAAATGGACCAAACCCTGCCTCCCGCAATAAGAGTTCTGATGGAAGTACCTCCTTTACACCTACTGCCGCGTGTTTTAGTAAGTATGGAAACCTGGTTTATGTGGGAAACTCTAAAGGGGAAATTCTTGTAATTGACAGTAAAGACGGTGAGGTGCGTGGCATGGTTCCCATCTCTGGTGGTTCAGTAGTAAAGAGCATTGTATTCAGCAGGAACGGACAGTATCTTCTAACAAACTCTAATGACAGAGTAATAAGGATCTATGAAAATCTTCTTCCTTTGAAAGATGAAGTTAGAGTACTAGATGAACTGAATAAGAGCTTCGGTGATCTAAATGGTGTTGAGAAGTTGAAGGCCATAGGATCAAGATGTTTAACTTTATTTCGAGAGTTTCAAGACGCAATAACAAAGGTGCACTGGAAAGCACCCTGTTTCAGTGGTGATGGTGAGTGGGTTGTTGGTGGTTCTGCTAGCAAAGGAGAGCATAAGATTTACATATGGGATAGAGCTGGACATCTTGTGAAAATCCTTGAAGGGCCTAAGGAAGCCCTTATTGATTTAGCATGGCATCCTGTACGTCCTATTGTTGTATCTGTTTCTTTGAATGGCATAGTTTTTATCTGGGCTAAAGATTACACCGAGAACTGGAGCGCTTTTGCTCCTGATTTCAAAGAGCTTGAGGAAAATGAGGAGTACGTGGAACGAGAAGATGAATTTGATTTGAATCCTGAGACTGAGAAGCCAAAAGGATCTGATGTCAATGAAGATGACAAAGTTGACATTATGACAGTGGAGAAGGATCCTAATTTCAGCGACTCTGATATGTCCCAAGAAGAATTATGTTTCCTACCAGTATCTCCCATACCTGATGTTCATGAACAGCAAGATAAGTTCTTAGAAAGTTCTTCAAAGGTGGTGGACAGCAATAACTCTGGATCCCCATTCTCAGAAGAGGCTGTTACAAATGAACATATGATGAATCATGCCTCAAGTCCAGTGGAAGATGATGCTGCAGGAACACGAATTAAAAGAAAGCGGAAACCATCAGAGAAGGTGTTGGAGTTGCAGGCAGAAAAAGTCAAGAAACCTTTGAAATCTAGCAAATCGTCGAGAACCAAAACAAAATATTTGGTTGATGAGAATGCTGCTATACCATTTCAAAATGGTTGA 1635 0.4141 MNASIIDPLQGDFPEVIEEYLELEHGIMKCIAFNRRGTLLAAGCNDGSCVIWDFLTRGVAKELRDSECSSPITSICWSKCGNRILVSAADKSLSLWDVLSGKRIRRIVLQQTPLQARLHPGSSKLCLACPLSCTPMIIDLNTEDTTFLKVSVSEKPNGPNPASRNKSSDGSTSFTPTAACFSKYGNLVYVGNSKGEILVIDSKDGEVRGMVPISGGSVVKSIVFSRNGQYLLTNSNDRVIRIYENLLPLKDEVRVLDELNKSFGDLNGVEKLKAIGSRCLTLFREFQDAITKVHWKAPCFSGDGEWVVGGSASKGEHKIYIWDRAGHLVKILEGPKEALIDLAWHPVRPIVVSVSLNGIVFIWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLNPETEKPKGSDVNEDDKVDIMTVEKDPNFSDSDMSQEELCFLPVSPIPDVHEQQDKFLESSSKVVDSNNSGSPFSEEAVTNEHMMNHASSPVEDDAAGTRIKRKRKPSEKVLELQAEKVKKPLKSSKSSRTKTKYLVDENAAIPFQNG 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00472 544 MobiDBLite consensus disorder prediction 152 172 - -
Vifa4g00472 544 MobiDBLite consensus disorder prediction 388 410 - -
Vifa4g00472 544 ProSiteProfiles Trp-Asp (WD) repeats profile. 69 106 IPR001680 GO:0005515
Vifa4g00472 544 Gene3D - 253 383 IPR015943 GO:0005515
Vifa4g00472 544 Pfam WD domain, G-beta repeat 70 97 IPR001680 GO:0005515
Vifa4g00472 544 Pfam WD domain, G-beta repeat 25 53 IPR001680 GO:0005515
Vifa4g00472 544 Pfam WD domain, G-beta repeat 288 323 IPR001680 GO:0005515
Vifa4g00472 544 Gene3D - 18 252 IPR015943 GO:0005515
Vifa4g00472 544 SMART WD40_4 325 364 IPR001680 GO:0005515
Vifa4g00472 544 SMART WD40_4 14 53 IPR001680 GO:0005515
Vifa4g00472 544 SMART WD40_4 161 201 IPR001680 GO:0005515
Vifa4g00472 544 SMART WD40_4 56 97 IPR001680 GO:0005515
Vifa4g00472 544 SMART WD40_4 204 244 IPR001680 GO:0005515
Vifa4g00472 544 SMART WD40_4 276 323 IPR001680 GO:0005515
Vifa4g00472 544 SUPERFAMILY WD40 repeat-like 24 363 IPR036322 GO:0005515
Vifa4g00472 544 MobiDBLite consensus disorder prediction 395 410 - -
Vifa4g00472 544 MobiDBLite consensus disorder prediction 482 528 - -
Vifa4g00472 544 ProSiteProfiles Trp-Asp (WD) repeats profile. 21 53 IPR001680 GO:0005515
Vifa4g00472 544 PANTHER RETINOBLASTOMA-BINDING PROTEIN 5 4 509 IPR037850 GO:0048188
Vifa4g00472 544 FunFam Compass component swd1 163 423 - -
Vifa4g00472 544 MobiDBLite consensus disorder prediction 492 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00472 Vifa-Chr4 131548663 131553505 Dispersed/Tandem