Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00414 ATGGAGGAGAGTGGTGGTGATTTTCCTGCTGCTGAAGATTTGGTAGTGGACCACGTCCACGTCGACAAGGGCAAAAACGAAAATAACCCTTCTTTGGCCAAACATGTCCTGCTCTCCTCAGCCACGTCTGATTCACCTTATATCATAGGGGCTTCTGAGGAGTTTCCATTGGGTCGACTTTATGAAATTGATCATTCCAAACTTCCACAGAATTGCCCTTCTCAAATAAAATGTGTGAGCATTGTAATGGTCTGTGACAAAGGGGAGCAAGAAGTATCTCTGAGGTATCCAAGCCTTCACTCTCTTAGCACTCATTTCAACCACCAAAGCTTTGGAAAGCCGGGCGGGAAGAAAATCCCGACACTTGACGAGAAGTACGTGATGGGAATCGAATTCGCCATCAAAACACTTTGCAGAAGCATCTCAGCTGAGGAGTTTGCTCAGAAAAGAAACTCATGGAGCTTCTGGGCTTCTCCCACTGAAGAAACCTTTCTAAACCATAACAGTCCAGTTATCAATGATGCTGCTACTAGTTTGGTTTCCAAGCAGGGTCCATGTTGGTCTCAGCTCAAGTTCACGGGTATGGTGCAGTGGGGTCAACGCAGACAAGTTCGGTTCCTGGGCCGTCATGAGGAGCAAAAGGTTGAATCTTTACACCAACTTCATAAGGAAAAAAGTGCCATTTTTGAAAGGGAAAAGACTTATAAGAAGAGAAAGAGCGTTGAAGAAGAAATGGAGGCTGTAAAGGTAGCTCCTTTTGGGGTACTGAGGATGACTCGTCAGAGCTTCAAAAATCCACAAGATATGAGTAGTAGCAGCGGGGCTAAAAAGTCTAAGAAAGCAGAAAACGACACTAAGCAGCAGCAACTCGTTGTTTATAGGAAAAAAGGGCGGAAAATATCAATTGACAGATGGTCCGCTGAGAGGTATCACATGGCAGAGGAGAATATGTTGAAGGTTATGAAGGAAAGAGAAGCTGTGTATGGAAACCCAATAATGAGGCAAGACTTGAGATCAGAAGCACGAAAGTATATTGGTGACACAGGTTTACTTGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCAGGAGGAGTTGAAAGATTCCGCCGACGTCACAATGCTGAAGGTTCAATGGAATACTGGTTAGAGAGTGCGAATCTCATTGATATCAGAAAGGAAATGGGTGTACAAGATCCTTACTGGACTCCTCCCCCAGGATGGAAGCCTGGAGACAGCATGTCACCAGATCATGTTACTAGGAATGAGCTCAGGGAGATAAGGGAGGAAATAATTAAGTTGAAACGAGATATGCTGGATCTCAAATCAAAAAAAGAAGAGGAAGCCTTGGCCATTGTGGCTACTTCTAGTCCTTGTTTGTCAAGTTTGAACTATAGGGACTATGATTCCCAGGTTGATAAGCAGGAGATTTATGCTGAGCTGGTTCATAAAAAGGCTATAGTTGAAGAACAGCTAAAAGAAATTACTCTGACTTTGAATGGCATGGAGGGCCAACTTGGAATGCAGAAGCCAACAATGTCAGAACCATTAACACCACCAGCGTTATTGCTAGGACCAACATCATCATTGACAGAAAACATTGGAGAAGTGACAAGGGAGAATGACAAAGGAACAAAATCAGCGGACACACAAATGGTACGGAGCAGCGCAGCAGAGCAGAAGGCAGCAAAGATAGAAAGACTGAAAAGTGGTTTTAAAATCTGCAAACCAAGAGGTACCTTTATGTGGCCAAATATGAGCTTGTCTCCTCATGTTGTGGCTAACCTTGATGAACTCACTGTGGTCCCAACCCCGTCCTCAGTTTCCTCTTCTACCACATCAGCTCCCAAGCTTGTCTCCAATTCCAAGACTGAGAACTTGCCACTATCCATACCTTCCCCTTCTTCTCCTGTTAAGCCACTAGCAGAGAGGCGCCCTGTGAGCACAGCTACTTTGACACATGTCACTGGACCCTTTTCCCCTCACCTTTCTCCTCCATTAGAGACCTCAAAATCCACAATCACCAAGAAGGATTCTTCTATTAACCTCAATGAGACTCCTCTGGCCCAAGAGTAG 2079 0.4478 MEESGGDFPAAEDLVVDHVHVDKGKNENNPSLAKHVLLSSATSDSPYIIGASEEFPLGRLYEIDHSKLPQNCPSQIKCVSIVMVCDKGEQEVSLRYPSLHSLSTHFNHQSFGKPGGKKIPTLDEKYVMGIEFAIKTLCRSISAEEFAQKRNSWSFWASPTEETFLNHNSPVINDAATSLVSKQGPCWSQLKFTGMVQWGQRRQVRFLGRHEEQKVESLHQLHKEKSAIFEREKTYKKRKSVEEEMEAVKVAPFGVLRMTRQSFKNPQDMSSSSGAKKSKKAENDTKQQQLVVYRKKGRKISIDRWSAERYHMAEENMLKVMKEREAVYGNPIMRQDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGVERFRRRHNAEGSMEYWLESANLIDIRKEMGVQDPYWTPPPGWKPGDSMSPDHVTRNELREIREEIIKLKRDMLDLKSKKEEEALAIVATSSPCLSSLNYRDYDSQVDKQEIYAELVHKKAIVEEQLKEITLTLNGMEGQLGMQKPTMSEPLTPPALLLGPTSSLTENIGEVTRENDKGTKSADTQMVRSSAAEQKAAKIERLKSGFKICKPRGTFMWPNMSLSPHVVANLDELTVVPTPSSVSSSTTSAPKLVSNSKTENLPLSIPSPSSPVKPLAERRPVSTATLTHVTGPFSPHLSPPLETSKSTITKKDSSINLNETPLAQE 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00414 692 PANTHER PROTEIN DYAD 54 674 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vifa4g00414 692 MobiDBLite consensus disorder prediction 650 692 - -
Vifa4g00414 692 MobiDBLite consensus disorder prediction 261 289 - -
Vifa4g00414 692 Coils Coil 425 445 - -
Vifa4g00414 692 MobiDBLite consensus disorder prediction 604 692 - -
Vifa4g00414 692 MobiDBLite consensus disorder prediction 604 633 - -
Vifa4g00414 692 MobiDBLite consensus disorder prediction 540 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00414 Vifa-Chr4 111058536 111062628 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00414 300 390 PHD Transcription Factor Family AT5G22260 39.583 1.11e-07 53.1