Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00405 ATGCTTTACCACAGCTCAAATTCCATTTTTCATTTCTTGCTACTAGCATCAATGGTAATTGGCATTGGAATGTCAGATTCATCGAAAGACAAACAAGAATGCACAGATCAATTGGCTAGTCTAGCAACATGTCTCCCTTATGTTGAAGGTCAAGGAAAATCTCCAGCAACAGATTGTTGTGATGGCCTCAAGACACTTCTTAAGACAAACGAAAAATGCTTGTGTTTAATTATCAAAGATCGTAATGATCCTGATTTGGGTGGTATAGTAATTAATGTCACTTTGGCTTTGAATCTTCCTAAAGTTTGTAATGCCCCTGCCAATGTCTCTAAATGTCCTGAGTTGCTGCACATGGATCCAAAATCAGCAGAGGCTCAAGTTTTTTATCAATTGAAGAATGGCTCCAGAAATATTGGCCCTAGTGCTGCACCTAGTTATTCACATGGAGCAAGCAATCATGCAAACAGTACTACAGAAAAGAGTGATGCATTCAGCAAAGAGAAGAAGTTGTTTGGATTAGAAGCTTTGGCTGTGGGGATTTTGGTTTGGTTTTTATTGGGCTCTACAGATGGAAATATTTTTATTGAGATACCAATGTGA 600 0.3833 MLYHSSNSIFHFLLLASMVIGIGMSDSSKDKQECTDQLASLATCLPYVEGQGKSPATDCCDGLKTLLKTNEKCLCLIIKDRNDPDLGGIVINVTLALNLPKVCNAPANVSKCPELLHMDPKSAEAQVFYQLKNGSRNIGPSAAPSYSHGASNHANSTTEKSDAFSKEKKLFGLEALAVGILVWFLLGSTDGNIFIEIPM 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00405 199 Gene3D - 31 112 IPR036312 -
Vifa4g00405 199 Pfam Probable lipid transfer 16 112 IPR016140 -
Vifa4g00405 199 SMART aai_6 34 112 IPR016140 -
Vifa4g00405 199 FunFam Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein 31 112 - -
Vifa4g00405 199 CDD AAI_LTSS 41 104 - -
Vifa4g00405 199 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 20 150 IPR043325 -
Vifa4g00405 199 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 32 113 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00405 Vifa-Chr4 109647865 109648595 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00405 26 186 Acyl Lipid Metabolism Gene Families AT2G44300 48.864 7.90e-55 171