Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00400 ATGTGCAGCTCCAAAACCAAAGTAACAGCAGCAGGCATAGAAATCACAACCTCAGCCACATCACCTGTTGCCAAAATCAATGGCAGACCTGTTCTTCAACCAACTTGTAACAGAGTTCCAAACATTGAAAGAAGAAACTCAATCAAGAAACTTCCACCAAAATCACTTTCACCACCACTTCAGACCAAAACTTCATCAACGCCTCCACTTTCACCCAAGTTATTAAAGTCACCAAGGCCAACACCAACACCAACACCAACAAAGAGAATCAATGAAACTTATCTCTTCAACACTAGTTCTGAAAAGATTGTAACACCAAGAAACTCAACAAAAACTTCAACTTTAAAAAAATCCAAGAGTTTTAAACAAGGCTCATATGGTAATGACTCTACTGAATCATCATTGAGTTACTCTTCAAGTTTGATCACTGATTCACCAGGAAGTATTGCTGGTTTGAGGAGAGAACAGATGGCATTGCAGCATGCTCAGAGAAAAATGAAGATTGCTCATTATGGAAGATCAAAGTCTGCAAAATTTGAAAGTGTTGTTGCTCCTCTTGATACTTTAAACAATCTTGCTTCAAAAACAAGTGAAGAGAAGGAGAAAAGATGCAGCTTTATCACACCCAATTCAGATCCAATCTATATTGCTTATCATGATGAGGAATGGGGAGTTCCAGTGCATGATGACAAAATGTTGTTTGAACTTCTAGTTTTGAGTGGTGCTCAAGTTGGATCTGATTGGACCTCAATCTTAAAGAAACGTCATGAGTTCAGGACTGCATTTTCTGAATTTAATCCAGCAACTTTGGCAAACTTGACTGATAAGCAAATGATATCTATTAGTTTGAAACATGGCATTGATATAAGCAGAGTTAGAGGAGTTGTTGATAATGCTAATCGAATTTTGGAGGTTAACAAGGAGTTTGGTTCATTTGACAAATACATATGGGGTTTTGTGAATCATAAACCCATTTCCACACAATACAAATTTGGCCACAAGATTCCAGTGAAGACATCAAAATCAGAAAGCATAAGCAAAGACATGATTAGAAGAGGGTTTAGGTTTGTAGGCCCCACAATGGTTCATTCTTTTATGCAAGCAGCTGGCCTCACCAATGACCACTTAATCACTTGCTTCAGGCACTTGCAATGCACCTTATTATCATGCTAA 1173 0.3802 MCSSKTKVTAAGIEITTSATSPVAKINGRPVLQPTCNRVPNIERRNSIKKLPPKSLSPPLQTKTSSTPPLSPKLLKSPRPTPTPTPTKRINETYLFNTSSEKIVTPRNSTKTSTLKKSKSFKQGSYGNDSTESSLSYSSSLITDSPGSIAGLRREQMALQHAQRKMKIAHYGRSKSAKFESVVAPLDTLNNLASKTSEEKEKRCSFITPNSDPIYIAYHDEEWGVPVHDDKMLFELLVLSGAQVGSDWTSILKKRHEFRTAFSEFNPATLANLTDKQMISISLKHGIDISRVRGVVDNANRILEVNKEFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMIRRGFRFVGPTMVHSFMQAAGLTNDHLITCFRHLQCTLLSC 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00400 390 MobiDBLite consensus disorder prediction 57 72 - -
Vifa4g00400 390 Pfam Methyladenine glycosylase 210 382 IPR005019 GO:0006284|GO:0008725
Vifa4g00400 390 PANTHER OS04G0501200 PROTEIN 23 386 - -
Vifa4g00400 390 Gene3D Hypothetical protein; domain 2 201 383 - -
Vifa4g00400 390 MobiDBLite consensus disorder prediction 102 139 - -
Vifa4g00400 390 SUPERFAMILY DNA-glycosylase 202 385 IPR011257 GO:0003824|GO:0006281
Vifa4g00400 390 MobiDBLite consensus disorder prediction 29 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00400 Vifa-Chr4 106670609 106672253 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00400 4 106670609 106672253 Vifa4g00400 4 106670609 106672253 ECH
Vifa1g04378 1 680504249 680506101 Vifa4g00400 4 106670609 106672253 PCT