Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00380 ATGGCCACCGTCATAGAATCCATGGCCATCGTTCCTCACCCTTCTTCTGTCACCCGGAGTTCTCTCAAGTTCTCACGTTACGTGGCCCTAAAACTGAAGCCCAATCCCAAATTCAGGCCCATTTTCACTGCTTCGCCTGCTTTCAGAAACGCTACCCGCACTTCACGTGTAGTGTGCGAGGCCCAGGATACCGCTGTGGATGTGGCTCCTATAACGGAAGCAAATTGGCAATCACTTGTACTTGAATCTGATTCACCCGTTTTGGTTGAGTTCTGGGCTCCATGGTGTGGTCCCTGCAGAATGATCCACCCTATACTTGATGAACTAGCAAAACAATATGCTGGGAAACTCAAGTGTTACAAACTCAATACAGATGAGAGTCCTTCAACTGCTACCCGCTACGGAATTAGAAGTATCCCAACTGTTATGATCTTTAAAGACGGTGAAAAGAAAGACACTGTTGTTGGAGCTGTGCCCAAGTCAACACTAACATCCACCATAGAAAAAATCTTATAA 516 0.4632 MATVIESMAIVPHPSSVTRSSLKFSRYVALKLKPNPKFRPIFTASPAFRNATRTSRVVCEAQDTAVDVAPITEANWQSLVLESDSPVLVEFWAPWCGPCRMIHPILDELAKQYAGKLKCYKLNTDESPSTATRYGIRSIPTVMIFKDGEKKDTVVGAVPKSTLTSTIEKIL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00380 171 FunFam Thioredoxin 61 171 - -
Vifa4g00380 171 PANTHER GEO12009P1 57 170 - -
Vifa4g00380 171 Pfam Thioredoxin 68 169 IPR013766 -
Vifa4g00380 171 SUPERFAMILY Thioredoxin-like 62 171 IPR036249 -
Vifa4g00380 171 ProSitePatterns Thioredoxin family active site. 88 106 IPR017937 -
Vifa4g00380 171 NCBIfam thioredoxin 72 170 IPR005746 GO:0015035
Vifa4g00380 171 CDD TRX_family 74 168 - -
Vifa4g00380 171 Gene3D Glutaredoxin 68 171 - -
Vifa4g00380 171 PRINTS Thioredoxin family signature 87 95 - -
Vifa4g00380 171 PRINTS Thioredoxin family signature 95 104 - -
Vifa4g00380 171 PRINTS Thioredoxin family signature 135 146 - -
Vifa4g00380 171 ProSiteProfiles Thioredoxin domain profile. 39 171 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00380 Vifa-Chr4 101181290 101181907 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00380 4 101181290 101181907 Vifa4g00380 4 101181290 101181907 ECH