Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00350 ATGGCAGAGGAATTGATATTGTTAGATGAATGGCTCAGTATGTTTGGTATGAGAGCAAGGATAGCATTGGCTGAAAAAGGGATAAAGTATGGGTACAAGGAAGAAGATCTTGACAACAAGAGCCAACTGCTTTTGCAAATGAACCCAATTCACAAGAAGATTCCAGTTCTTATCCATAAGGGAAAACCCATTTATCCTTATCACAAATCTCAAGAAAAATTTTGGGCTGATTTTGTCAACAAGAAGATTGGTGATGTTGGGGGGAGGATATGGCCTGGGAAGAGAGATGAGATTGAAGTGGCAAAAAAAGAGTTGATTGAAGGGTTAAAGGAATTGGAGAATGTGCTTGGAGACAAACCTTATTTTGGTGGTCACACATTTGGGTTTGTTGATATTGCTTTGATCCCTTTCTACAGTTGGTTTTATACTTATGAGGAGTTATGCAACTTCAAAGTTGAGGCAGAGTGTGATAAGCTGATTGCTTGGGCAAAGAGATGCAAACAAAGGGAGAGTGTTTGCAAATCTGTTGCTGATGAGAAAGAGGTGTATGAGTATGTTGTTAACTATAGGAAGAGATTTGACTTGGATTGA 591 0.3892 MAEELILLDEWLSMFGMRARIALAEKGIKYGYKEEDLDNKSQLLLQMNPIHKKIPVLIHKGKPIYPYHKSQEKFWADFVNKKIGDVGGRIWPGKRDEIEVAKKELIEGLKELENVLGDKPYFGGHTFGFVDIALIPFYSWFYTYEELCNFKVEAECDKLIAWAKRCKQRESVCKSVADEKEVYEYVVNYRKRFDLD 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00350 196 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 65 195 IPR010987 -
Vifa4g00350 196 Coils Coil 95 115 - -
Vifa4g00350 196 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 184 IPR045073 -
Vifa4g00350 196 Gene3D - 68 196 - -
Vifa4g00350 196 SUPERFAMILY GST C-terminal domain-like 66 192 IPR036282 -
Vifa4g00350 196 Gene3D Glutaredoxin 1 67 - -
Vifa4g00350 196 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 87 IPR004045 -
Vifa4g00350 196 Pfam Glutathione S-transferase, N-terminal domain 4 64 IPR004045 -
Vifa4g00350 196 SUPERFAMILY Thioredoxin-like 5 65 IPR036249 -
Vifa4g00350 196 CDD GST_C_Tau 66 186 IPR045074 GO:0004364|GO:0006749
Vifa4g00350 196 FunFam Glutathione S-transferase U20 65 196 - -
Vifa4g00350 196 Pfam Glutathione S-transferase, C-terminal domain 98 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00350 Vifa-Chr4 89869288 89870036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00350 1 193 Glutathione S-transferase Gene Family AT1G78380 55.093 4.68e-80 236