Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00343 ATGACTAGAATACAAGGCAGTTCCGGAAAGACGGCGCAGAAAGAAACAGAGCAATTTTTAGAGAGAGAAAGTTCAAGTGGCGTGTTCCCCATTGTTTTAGAGGGAGAAAGTTCAAGTGGCAGATTCCAAACGCTGAAATCTCTGTTTCAACCATTGTGTTACCATCATCAGACAAAAAAATATGGCATGATGGAACAATCAAGAAATGACCATGGATCTCAGTCAGTAATGCAGGACTATCTCGACACCATGTACCCTAATAGAACACAATCAGACGTTAAACCAGTACTCAATTATTCAATACAGACTGGCATCACTCATGCAGGGCTTGACAAAGCTTCAACACAGTTTAACAGCCAAACTGCATGGTTACATGGCTCAATTCCATCACCACCAAAAACTTCCTTCAATCAACAGACTGCTCAATTTGGGCAAGGCTATGCTTCTTACGCTGCTTCCGATACCTCATCAACCATGATCAAAAAGGACATATCTTGGCCGGACCTTTGGCGTAGAGCATTCTTAATCTACAATCTGGTTCATATACTCAAGTATCAACTTCCTGGGGAAGATCTCGATGCTTTGGTATCTGTATCATCTGATGAGGATTTACAGAATATGATGGAGGAGTATAACCATATAGAGGATACAGAACCCCCGCAAAAGCTTAGGATTTTTTTGTTCTCAATCACTGATTTACAAGATGCTCAGTTCGCTCTTAGTACCATTGGTGGTGATTCTCAGGTCCAGTATGTTGTTGCTGTTAATGGTATGGACTCGGGCTCAAGAACCACCTCAACCCCACTTGGTGTCAGCATTTCAAACAATGACATACATAAATTTAACACAAAAACTATCCAAACGGACACTAGTAATGTTGCTGTAGAATCTATACGTGTCACAGATGCTCCCTTGACTGGCAAATCTGACACTCCATTGGCTACCCATTGTCAATATCCTATTCACCACCGCGCTCTTCATCCCTCTCATAACCTTGTGGTTGGAGAGACCCCCATTTCTCTGGCTCCTCATCTTTTGAACAATCAATCAGGGATTCTGAATGAAGACCATCCACCTAGGGGAGTACAAGTACAAAAATCCGAACCATCTACCTTGCAGGTGAAAACAATAAGTGAAAATTCAAGCAAACAAGGGAGTGACCACGGCGACGTTCTATCCTTGGAAATCCCATCCCCGTCTCCGTTTCAGCCCATTGATGGTTACTTGAAAAACAATGGTCCTGAAGCATCAGCTGCGGTTACCATGCCTGAGGGGCATCTACCTTCGCTCCCTTGCACAAAAAAAGTTCAGCACCAGGATTGTAATGCTTCTTCTACATCTAGCAATTCATTTGCTCCTAATTATGTTGATTCCCACTCCAATGCAATTGATTTGAGTTCTCTTCACCCCCCTCCAATTCCTAAAAGATTTTACTGTTCAGAAAGAACTCCGAGGGAGCAAGTAGAGGTCCTGAATCGGTCCTCAAAGTCAGATGATGCACACAGCTCGCAGTTTAATGTGTCAGATTTGCTTTCTGATACCAAGGCAGAGGATCCAGTAACAGAATCTGGTGACAACTTACATGATGGTAATCTGTTAGATCCAGATGACAAATCAAGTATTTCAGCAAAGCCCTTTCCTGAAGATGACCATACCATTGACAATGGGTTTGCCAGCCATCAAATGAATAAACCGTTGCTTGATACAAACAGTGAGATAAAGTCTAACCTGTCTGAGCACATGGATCCTGAGTTGAAGCAAGTCTTGTTGAGTAATGAAGGAATTAAAGACGTGGAAACTAAAGATAATCATATCAAGCCCTTGTTTGATGAAACCGAAACTAAATATGGTAAATCAGATCTACCTGTTGTTCACCATGTTTCTTCTGTTGAGCGCCTTGATGTTATTGCATCCAATCTTCCAGAGATTGAATTGGGGTGA 1941 0.4219 MTRIQGSSGKTAQKETEQFLERESSSGVFPIVLEGESSSGRFQTLKSLFQPLCYHHQTKKYGMMEQSRNDHGSQSVMQDYLDTMYPNRTQSDVKPVLNYSIQTGITHAGLDKASTQFNSQTAWLHGSIPSPPKTSFNQQTAQFGQGYASYAASDTSSTMIKKDISWPDLWRRAFLIYNLVHILKYQLPGEDLDALVSVSSDEDLQNMMEEYNHIEDTEPPQKLRIFLFSITDLQDAQFALSTIGGDSQVQYVVAVNGMDSGSRTTSTPLGVSISNNDIHKFNTKTIQTDTSNVAVESIRVTDAPLTGKSDTPLATHCQYPIHHRALHPSHNLVVGETPISLAPHLLNNQSGILNEDHPPRGVQVQKSEPSTLQVKTISENSSKQGSDHGDVLSLEIPSPSPFQPIDGYLKNNGPEASAAVTMPEGHLPSLPCTKKVQHQDCNASSTSSNSFAPNYVDSHSNAIDLSSLHPPPIPKRFYCSERTPREQVEVLNRSSKSDDAHSSQFNVSDLLSDTKAEDPVTESGDNLHDGNLLDPDDKSSISAKPFPEDDHTIDNGFASHQMNKPLLDTNSEIKSNLSEHMDPELKQVLLSNEGIKDVETKDNHIKPLFDETETKYGKSDLPVVHHVSSVERLDVIASNLPEIELG 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00343 646 MobiDBLite consensus disorder prediction 351 397 - -
Vifa4g00343 646 Gene3D - 152 230 - -
Vifa4g00343 646 SMART PB1_new 143 230 IPR000270 GO:0005515
Vifa4g00343 646 MobiDBLite consensus disorder prediction 1 22 - -
Vifa4g00343 646 MobiDBLite consensus disorder prediction 364 388 - -
Vifa4g00343 646 PANTHER OS05G0427100 PROTEIN-RELATED 150 460 - -
Vifa4g00343 646 MobiDBLite consensus disorder prediction 515 555 - -
Vifa4g00343 646 MobiDBLite consensus disorder prediction 488 563 - -
Vifa4g00343 646 MobiDBLite consensus disorder prediction 497 511 - -
Vifa4g00343 646 Pfam PB1 domain 158 228 IPR000270 GO:0005515
Vifa4g00343 646 SUPERFAMILY CAD & PB1 domains 150 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00343 Vifa-Chr4 88222120 88224852 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa4g00343 445 529 MAP Kinase Kinase Kinase AT1G79570 49.412 1.19e-14 75.9