Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00265 ATGGAAGTATCAAATGATTCAGGCTCTAAGAAACCAAAAAGGTTGACATCTGTTGTCTGGAATCACTTTGAAAGGATTAGAAAGGCTGATGTATGTTATGCTGTTTGCCTACATTGTAACAAGAGACTTAGTGGATCGAGTAACAGTGGAACTACTCATCTAAGAAACCACTTGATGCGGTGTCTGAAAAGATCAAACTTTGACGTTTCTCAATTGCTTACAGTAAAGAGAAGGAAAAAAGATAATACTGTCAGCCTAGCAAACATTAGTTTTGATGAAGGTCAGAGGAAAGAAGAATATATAAAGCCAGCATTCGTCAAGTTTGAACAGGAACATAAGAAAGATGAAATCATTAACTTCGTAAGTAGTAAATTTGATCAGGATAGGAGTCAACATGATCTCGCTCGTATGATCATATTACATGGATACCCATTGACATTGGTTGAACAAGTAGGATTCAAAGTCTTTGTGAAGAACCTCCAGCCTCTCTTTGAGTTCTTGCCAAATAGCAACTTAGAGGGTTCTTGTATAGAAATCTACAGGAGGGAGAAAGAGAAAGTGAATGAGATGATAAACAAATTATGTGGCAGGATTAATCTCTCCATCGAAATGTGGTCTTCCGCAGAAAATACCTCATTTTTGTGTCTATCTGCGCATTATATTGATGAGAAATGGACATTGCAGAAGAAAATTTTGAACTTTCTTACACTCGACTCTTCTTACACTGAAGACTTGCTTCCTGAAGTGATTATCAAATGCCTTGATGAATGGGATATTGACTGCAAGCTATTTGCGTTGACTCTTGATGATTGTTCTGTTGACGATGACATCACTCTCCGAATCAAAGAGCGTGTTTCCGAGAAAAGGCCTTTCTTAAGTACTCGACAAATACTCGATGTACGCTCTGCAGCACATCTCATAATTTCCATTGTTCAAGATGCCATGGATGCATTGCATGAGTTGATCCAAAAGATTCGAGAGAGCATCAGATACGTTAAAAGTTCAGAAGAAGTTCAAGGAAAATTTAATGAAATTTCTCAACGTGCTGGGATCAACTCTCCTAAGGCCTTATTTCTTGATAATCCACTACAATGGAATACTACATATATCATGCTCGAAACTGCACTAGAATACAGGGGTGCTTTTTCTCTCCTCCAAGAACATGATCTCTCCTACTCATCAAATCTATCCGATGAAGAGTGGGAATGGGCTAATTCTGTTGCTGGATATTTAAAACTCCTTGTTGAAATTATGAATATCTTCTCAAGCAACAGATTTCCTACAGCTAACATATTCTTCCCTGAGATCTGTGACATTCATATTCAATTAATTGACTGGAGCAGAAGTTCTGACAATTTTCTTAGTCCCATGGCTTTGAAGATGAAAGCCAAATTTGATAAGTACTGGAGCAAGTGCAGTTTGGCTTTAGCTTTAGCTGCAGTCCTAGATCCCCGGTTTAAAATGAAGTTGGTTGAGTACTACTACTCCTTGATATATGGAAGCACTGCTTTGGATCGTATCAAGGAAGTTTCTGACGGTATCAAAGAACTTTTTAATGCATATTCTATCTGTTCGACAATGGTCGATCAAGGGTCAGCCTTACCTGGAAGTAGCTTACCAAGCACCAGTAGTGGTGGCAGGGATAGACTAAAAGGCTTCGACAGATTCCTTCACGAGACGTCACAGAGTCAGTCGATGACATCAGACTTGGACAAGTATTTAGAGGAACCGATATTTCCTCGTAATTCTGAGTTTAACATACTGAACTGGTGGAAAGTCCACATGCCCAGATACCCGATTTTGTCTATGATGGCGCGAGATGTTCTTGGGACTCCAATGTCAACTTTGGCACCTGAATTGGCTTTTAGCACAGGGGGCAGAGTGCTCGATTCTTCTCGCAGTTTGCTGAACCCAGATACACGAGAGGCTTTAGTATGCGCACAAGATTGGATCCGTAATGAATCAGGAGATTTTAATCCATCCCCAATCCATTCTGCTCCACCTCTTCTTGAATCAAGTTAA 2022 0.3971 MEVSNDSGSKKPKRLTSVVWNHFERIRKADVCYAVCLHCNKRLSGSSNSGTTHLRNHLMRCLKRSNFDVSQLLTVKRRKKDNTVSLANISFDEGQRKEEYIKPAFVKFEQEHKKDEIINFVSSKFDQDRSQHDLARMIILHGYPLTLVEQVGFKVFVKNLQPLFEFLPNSNLEGSCIEIYRREKEKVNEMINKLCGRINLSIEMWSSAENTSFLCLSAHYIDEKWTLQKKILNFLTLDSSYTEDLLPEVIIKCLDEWDIDCKLFALTLDDCSVDDDITLRIKERVSEKRPFLSTRQILDVRSAAHLIISIVQDAMDALHELIQKIRESIRYVKSSEEVQGKFNEISQRAGINSPKALFLDNPLQWNTTYIMLETALEYRGAFSLLQEHDLSYSSNLSDEEWEWANSVAGYLKLLVEIMNIFSSNRFPTANIFFPEICDIHIQLIDWSRSSDNFLSPMALKMKAKFDKYWSKCSLALALAAVLDPRFKMKLVEYYYSLIYGSTALDRIKEVSDGIKELFNAYSICSTMVDQGSALPGSSLPSTSSGGRDRLKGFDRFLHETSQSQSMTSDLDKYLEEPIFPRNSEFNILNWWKVHMPRYPILSMMARDVLGTPMSTLAPELAFSTGGRVLDSSRSLLNPDTREALVCAQDWIRNESGDFNPSPIHSAPPLLESS 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00265 673 ProSiteProfiles Zinc finger BED-type profile. 14 69 IPR003656 GO:0003677
Vifa4g00265 673 SMART bed5 14 64 - -
Vifa4g00265 673 Pfam BED zinc finger 17 60 IPR003656 GO:0003677
Vifa4g00265 673 PANTHER BED FINGER-RELATED 175 655 IPR045259 -
Vifa4g00265 673 Pfam hAT family C-terminal dimerisation region 569 651 IPR008906 GO:0046983
Vifa4g00265 673 Pfam Domain of unknown function (DUF4413) 422 521 IPR025525 GO:0003677
Vifa4g00265 673 SUPERFAMILY Ribonuclease H-like 185 653 IPR012337 -
Vifa4g00265 673 SUPERFAMILY beta-beta-alpha zinc fingers 17 64 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00265 Vifa-Chr4 53943626 53945755 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa4g00265 4 53943626 53945755 Vifa4g00265 4 53943626 53945755 ECH