Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa4g00246 ATGCCGAGGCCACAACGACCTTCATTCCGATCAAACGCCAAAATAAGCTCACGATATTTCATGGAATCTGTTAAGCCTTCAGCAGTGACACTACGCAAGAGTAAATTGTCTCGAACTCTTACAAAGGTTCTTCGTGCAAAATCAACGAGTGGAATTGCACAAGTTGAGGGGCTGCAGAATGTTAAAGTTGATGAAGGAAACATGACACACGGTGAAGAAGATGAAGAGCTTAAGAAAAAATTGGCAGTAGAAGCTTTGGTTTCGAGAGTTTTTGCTAGCATTTCAACTATAAAAGCTTCATATGCTCAGGTACAATATGCTCAATCACCTTATGACCCTGATGGAATTCAAGACGCTGATAAAGTACTAGTCTCAGAATTGAAAACCTTATCTGAACTCAAGCAATGTTGGTTCAAAAAGCAATTTCATTTTGATCCTTCGCCAGAGGGGGCGATTGTTGCAGCTGAATCGAAAGAGCTTAAGAGTGTTATAAAAACCTATAGGATAATGGGGAAGAAGTTTGAATGGCAAACACGGCTTAAAGACTCTGAGATTTTGTTTCTTAAAGAGAAGTTAGAGGAAGCAAATAAACAGAACAAGTCAATTGAAAAGAGGTTAAATCAAAGTGGTTCATTATCTTCTCTTGATAATCTTCACATCTCAGGACTAAGTCCTTCACATTTTATATCCGTTCTTCGCCACACTGTCAAATTAATTCGAAGCTTTGTGAAGTTGTTGGTGAATGAGATGAGATCCGCCGGTTGGGATATTGATGCATCGGTGAATACTATTATCGGAGGGAATGTTGTTTATTTGAAAGAAGATCACAAGTGTTTTGCAATCGAGTCTTTTGTTTGTAGGGAGATGTTCGATTCTTTCAACTTCCCTAATTTCAATCTTCGTCCTACCGATTTTCTTCCCGATAGAAACAAAACACAATTCTTCTTTTTGAATTTCAACGAGTTAAAATCCTCGAAAGCAAAAGAGTATCTTGGTTCGAAACCAAAATCAGCTTTCGCAAAGTTCTGCCGGACGAAATACTTGAGACTAGTCCACCCTCAAATGGAGGCATCATTTTTCGGTGACACGAAGCTGAGAATCAACATGGTGAACGGTGGGGAATTTCCCGATGATAACGACTTGTTCACATCATTTGCTGAAATGGCCAAGAGGGTATGGCTTTTGCATTGCTTAGCCTTTTCTTTTGAGGCTGAAGCTGAAATCTTTCAAGTAGGGAAAGGATGTAGATTCTCTGATGTTTACATGGAGAGTGTTGTGAATGTGAATGTGAATGATGATGAAGTAGCAATAGCAGTGGAATCTGAGCCACAAGTTGGTTTCACAGTAGTTCCAGGTTTTAAGATAGGTAAAACAGTTTTACAGTGCCAAGTTTACCTCTCACAGTTATTACAGCAAAGGTAG 1422 0.3931 MPRPQRPSFRSNAKISSRYFMESVKPSAVTLRKSKLSRTLTKVLRAKSTSGIAQVEGLQNVKVDEGNMTHGEEDEELKKKLAVEALVSRVFASISTIKASYAQVQYAQSPYDPDGIQDADKVLVSELKTLSELKQCWFKKQFHFDPSPEGAIVAAESKELKSVIKTYRIMGKKFEWQTRLKDSEILFLKEKLEEANKQNKSIEKRLNQSGSLSSLDNLHISGLSPSHFISVLRHTVKLIRSFVKLLVNEMRSAGWDIDASVNTIIGGNVVYLKEDHKCFAIESFVCREMFDSFNFPNFNLRPTDFLPDRNKTQFFFLNFNELKSSKAKEYLGSKPKSAFAKFCRTKYLRLVHPQMEASFFGDTKLRINMVNGGEFPDDNDLFTSFAEMAKRVWLLHCLAFSFEAEAEIFQVGKGCRFSDVYMESVVNVNVNDDEVAIAVESEPQVGFTVVPGFKIGKTVLQCQVYLSQLLQQR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa4g00246 473 Coils Coil 185 212 - -
Vifa4g00246 473 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 33 467 IPR040225 GO:0009639|GO:0009959
Vifa4g00246 473 Pfam Plant protein of unknown function (DUF641) 81 205 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa4g00246 Vifa-Chr4 48513950 48518443 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03299 1 513952952 513954334 Vifa4g00246 4 48513950 48518443 ECH
Vifa4g00246 4 48513950 48518443 Vifa4g00246 4 48513950 48518443 ECH