Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05167 ATGGGTTCAGTTTCTCTGAAAATCGGTGATGGAACAGCAAGATTCAAAAGAGCATCACTTTGTTCTTCAGCTGTTAACATTCTCATGATTTTCTGTGTCATCACAACCAATCTCTTTGCTCTCTATGCTTTCACTTCATCATCTTCTTCCTCAAAAAACCACAACACCGACTACAACGTTATTCACAACAAGAACATCTCTCTTGTCTCAGAACAAGTGTCACTCATTCTCAGAGAGATTGATTTGTCTCAAAAGAAACTAGCCCAGATGGAAAAACAGCTTCTTGGTTATGAAAGATTTGATCTTTCAAGACCCAACATTGCTAATGAGCTGAAAATCTTCCTCCAGCGCCATCAACTTCCTCTAGGTAAAGATTCTAGAACTGGGGTCACTGAAATGGTTGCATCTGTTGGTCATTCTTGTGAGAAAAATTCAGACTTGGTGTCACAGTTCATGAATTACAAGCTTTCTGGAACTTGTCCTGATGATTGGAGTTTAGCTCAGAAACTGATCTTAAAAGGGTGTGAGCCATTGCCAAGAAGAAGGTGTTTTTCTAAAACTGTTTCAAAATTAGGGTTTTTTCCTTTACCTGTTTCTCTATGGAAGCCTCTTGGTAATGGTAATAACACTTTTAATTGGAGTGGTTTGAAAGGTAAGAAATTGAGTAGAGATTGTGTTAATTGTTTTGATTTGGTTAATGGTGGAATTGAGAATCAAAGGTTTTTGAAGGGTAAGAGTAAAAATGATTTTTTGATTGATGATGTTTTAGGTTTAGGAAATGGTGGAATTAGGGTAGGTTTTGATATTGGTGGTGGTTCTGGTTCTTTTGCTGCTAGAATGTTTGATAGAAATGTTACTGTGATTACAAATACTCTTAATGTTGATGCACCATTTAGTGAATTCATTGCTGCTAGAGGACTTTTTCCGATTTACTTGAGCTTAGATCATAGGTTTCCGTTTTACGACAATGTGTTTGATTTGATTCATGCTTCGAGTGCGTTGGATGTTGGTGGAGGAAAGGCGGAGAAGTTAGAGTTTTTGATGTTTGATATTGATCGAGTTTTGAGGGCCGGGGGTTTGTTTTGGCTTGATAATTTCTTTTGTGATAGTGAAGAGAAGAAACAAACTCTTACAAGGTTGATTGAAAGGTTTGGTTATAAGAAATTGAAATGGGTTGTGGGCGAAAAGGTTGATAGTTTTGGATCGGGTAAACCCGTAGTCGTGTTGTCTGCGGTTCTTCAGAAACCGGTTAGGTCGGGCTAA 1263 0.3793 MGSVSLKIGDGTARFKRASLCSSAVNILMIFCVITTNLFALYAFTSSSSSSKNHNTDYNVIHNKNISLVSEQVSLILREIDLSQKKLAQMEKQLLGYERFDLSRPNIANELKIFLQRHQLPLGKDSRTGVTEMVASVGHSCEKNSDLVSQFMNYKLSGTCPDDWSLAQKLILKGCEPLPRRRCFSKTVSKLGFFPLPVSLWKPLGNGNNTFNWSGLKGKKLSRDCVNCFDLVNGGIENQRFLKGKSKNDFLIDDVLGLGNGGIRVGFDIGGGSGSFAARMFDRNVTVITNTLNVDAPFSEFIAARGLFPIYLSLDHRFPFYDNVFDLIHASSALDVGGGKAEKLEFLMFDIDRVLRAGGLFWLDNFFCDSEEKKQTLTRLIERFGYKKLKWVVGEKVDSFGSGKPVVVLSAVLQKPVRSG 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05167 420 Coils Coil 73 93 - -
Vifa3g05167 420 Gene3D Vaccinia Virus protein VP39 238 400 IPR029063 -
Vifa3g05167 420 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 248 385 IPR029063 -
Vifa3g05167 420 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 260 387 IPR004159 GO:0008168
Vifa3g05167 420 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05167 Vifa-Chr3 1508827039 1508828301 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05167 3 1508827039 1508828301 Vifa3g05167 3 1508827039 1508828301 ECH
Vifa3g05167 3 1508827039 1508828301 Vifa2g04481 2 1316403672 1316404937 PCT