Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05149 ATGTCCACCACCACCACGTGTCTCCTCTTCTTCCTCCTTCCACTTCTCATAACCACCGTCATATCTCCGGTAGCCTCCGCCGGTAAAGGACAATGGAAGCTACTACAAAAAAACATTGGCATTGTAGCCATGCACATGCAACTCCTTCACACCGACCGCCTAATCATATTCGACCGGACCGATTTTGGTCTCTCCAACATTTCTCTTCCCAACGGGAAATGTCGTAACGACCCGACAGAAACCACTGTTAAAATCGACTGCACGGCGCATTCCATCGAATACAACGTCATATCCAACACTTTCCGTCCGTTGTTTGTTCAAACAGATGTTTGGTGTTCTTCCGGCGGGGTGAACCCGGCCGGAACACTTGTCCAAACAGGCGGTTTCAGTGACGGAGACCGCACCGTTCGAACTTTTGAACCTTGTAACAACTGCGATTGGTGGGAAATCCCCGGCGGACTTACTGCTCGGAGATGGTATGCTACTAATCATATTCTGCACGACGGCCGTCAGATTGTCATAGGCGGTAGAAGACAATTTAACTATGAATTTTACCCCAAAAACGACATTGGAGCAAAAAATTTATATACTTTACCATTTTTGGCTCAAACTAATGAACCTGTTGCAGAGAATAATCTGTATCCTTTTGTTTTTCTCAATGTTGACGGCCACCTCTTCATCTTTGCTAACAACAGAGCTATCCTCTTCGATTATAATAAGAATCTAGTGGTGAAAACATTTCCACAAATACCCGGTGGAGATCCTAGGAGTTATCCAAGCACAGGTTCTAGTGTTTTGTTACCATTGAATAATCTACAAGCAAGAGAAGTTGAAGCTGAGGTTTTGGTTTGTGGTGGAGCACCAAAAGGATCGTATCAAAAAGCAGAAACAAAAGAATTTATCGGAGCTTTGAATACTTGTGCCCGAATCAAAATAACCGACCCGGAACCGAAATGGGTAGTTGAAACAATGCCAGAAGGTAGAGTCATGGGTGATATGGTAATCCTTCCAAACGGTGACGTTTTGATAATTAACGGAGCCGGTTCAGGGACAGCCGGTTGGGAACTAGGACGAGAACCGGTTTTGAACCCGGTTCTTTATAAAACAAAAAAGCCAACCGGTTCACGGTTCGAGTCACAAAACCCTTCTAATACACCAAGAATGTATCATTCTACTGCTGTTTTGGTTCGTGATGGAAGGGTTATTATTGGTGGTAGTAACCCTCACATTGGTTATAGTTTTGGTAATGTTTTGTTTCCAACTGAACTCAGTCTTGAAGCTTTTTCACCTTCTTATCTTGAACCGGGTTTCGCGAATGTTCGTCCGAGGATTGTGTCTACTATTTTAGGGACACAAAAGTATGGTCAAGAGTTGAAGTTGAGGTTTCAGGTGAAAGCAGTGTTGGATGAGAATTTGGTTTCTGTTACAATGTTGGCACCGTCTTTTAATACACATTCGTTTTCAATGAATCAGAGGCTGTTGGTGTTGGACTCAAATAAAGTGGTTAAGGTGGAAGGAACAACGTTTGAAATTGAGGTTACTGTGCCTGGTTCACCTGTTCTTGCACCTCCTGGTTTTTATATGTTGTTTGTGGTTCATAAAGAAATTCCCAGTGAAGGTGTTTGGGTACATATAGTTTGA 1641 0.4321 MSTTTTCLLFFLLPLLITTVISPVASAGKGQWKLLQKNIGIVAMHMQLLHTDRLIIFDRTDFGLSNISLPNGKCRNDPTETTVKIDCTAHSIEYNVISNTFRPLFVQTDVWCSSGGVNPAGTLVQTGGFSDGDRTVRTFEPCNNCDWWEIPGGLTARRWYATNHILHDGRQIVIGGRRQFNYEFYPKNDIGAKNLYTLPFLAQTNEPVAENNLYPFVFLNVDGHLFIFANNRAILFDYNKNLVVKTFPQIPGGDPRSYPSTGSSVLLPLNNLQAREVEAEVLVCGGAPKGSYQKAETKEFIGALNTCARIKITDPEPKWVVETMPEGRVMGDMVILPNGDVLIINGAGSGTAGWELGREPVLNPVLYKTKKPTGSRFESQNPSNTPRMYHSTAVLVRDGRVIIGGSNPHIGYSFGNVLFPTELSLEAFSPSYLEPGFANVRPRIVSTILGTQKYGQELKLRFQVKAVLDENLVSVTMLAPSFNTHSFSMNQRLLVLDSNKVVKVEGTTFEIEVTVPGSPVLAPPGFYMLFVVHKEIPSEGVWVHIV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05149 546 PANTHER SECRETED PROTEIN-RELATED 9 545 - -
Vifa3g05149 546 CDD E_set_GO_C 436 545 IPR015202 -
Vifa3g05149 546 Gene3D - 26 436 IPR037293 -
Vifa3g05149 546 SUPERFAMILY Galactose oxidase, central domain 91 434 IPR011043 -
Vifa3g05149 546 SUPERFAMILY E set domains 438 545 IPR014756 -
Vifa3g05149 546 Gene3D Immunoglobulins 440 546 IPR013783 -
Vifa3g05149 546 FunFam Aldehyde oxidase GLOX 26 439 - -
Vifa3g05149 546 Pfam Glyoxal oxidase N-terminus 44 286 IPR009880 -
Vifa3g05149 546 Pfam Galactose oxidase-like, Early set domain 441 545 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05149 Vifa-Chr3 1504366349 1504368350 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05149 3 1504366349 1504368350 Vifa3g05149 3 1504366349 1504368350 ECH