Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05143 ATGAACACAATTCGATCCCGTTTCTCAGCAAAAATGGCGGCAGAAAACACCAGAAAAAACAACCTCGAATCCGGCGGTTTCTGGCCATTTCTCCGCCGTTGGATCCCCACTTCTACCGACCACATCATCAATGCCGAGAAGCGCCTTCTCTCTCTTGTCAAGACTCCGTATGTTCAAGAGCAGGTGAATATTGGTTCTGGTCCACCTGATTCCAGAGTGAGGTGGTTTCGTTCATCTAGCAATGAACCGAGGTTTATCAATACCGTTACCTTTGATGCTAAAGAGGATTCTCCTACATTGGTAATGGTTCATGGATATGCTGCTTCACAGGGTTTCTTCTTTCGCAATTTTGATGCACTTGCTTCGCGTTTTAGAGTCGTAGCTATTGATCAACTTGGTTGGGGTGGATCTAGCAGGCCAGACTTTACATGCAAAAGCACTGAAGAAACTGAGGCATGGTTCATTGATTCTTTTGAGGAATGGAGGAAAGCCAAAAACCTAAGCAATTTTATACTTCTTGGGCATTCTTTTGGTGGTTATATAGCTTCCAAATATGCACTTAAGCACCCAGAACACGTACAGCACTTGGTTTTGGTGGGATCTGCTGGATTTTCATCAGAAACAGAGAGGATTACAAAGTTTTTATCAACATGGAAAGGATCAATCCTGAACCAAATATGGGAATCCAATTTGACACCTCAAACAATAATAAGAGGCTTAGGTCCTTGGGGTCCTGATTTAGTCCACAGGTATACAAGTGCTAGGTTTGTCAAATACTCAACTGGGGAACTGTTGACAGAATCTGAATCGAGATTACTAACAGACTATGTTTATCATACATTAGCAGCCAAAGCTAGTGGTGAGTTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCCAAGTCGCCTCTTCTACACAGTGCCTCGGAGTGGAAAGTGCCTACCACTTTTATCTATGGTTTTAACGATTGGATGAATTACGAAGGGGCCCTAGAAGCTCGCAAGCATATGAAAGTTCCATGTGAAATCATCCGGGTTCCACAGGCTGGGCATTTTGTGTTCATTGAAAACCCATCTGCCTTCCATTCGGCTGTGTTTTATGCTTGTAGAAGGTTTCTCAGTCCTGATCCCGACAGTGAATCCCTTCCTGAAGGGCTAACATCTGCATAG 1173 0.4322 MNTIRSRFSAKMAAENTRKNNLESGGFWPFLRRWIPTSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVRWFRSSSNEPRFINTVTFDAKEDSPTLVMVHGYAASQGFFFRNFDALASRFRVVAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGGYIASKYALKHPEHVQHLVLVGSAGFSSETERITKFLSTWKGSILNQIWESNLTPQTIIRGLGPWGPDLVHRYTSARFVKYSTGELLTESESRLLTDYVYHTLAAKASGELCLKYIFSFGAFAKSPLLHSASEWKVPTTFIYGFNDWMNYEGALEARKHMKVPCEIIRVPQAGHFVFIENPSAFHSAVFYACRRFLSPDPDSESLPEGLTSA 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05143 390 PANTHER RE40534P-RELATED 33 367 - -
Vifa3g05143 390 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 84 370 - -
Vifa3g05143 390 Gene3D alpha/beta hydrolase 84 370 IPR029058 -
Vifa3g05143 390 Pfam alpha/beta hydrolase fold 98 210 IPR000073 -
Vifa3g05143 390 PRINTS Epoxide hydrolase signature 186 199 IPR000639 GO:0003824
Vifa3g05143 390 PRINTS Epoxide hydrolase signature 347 369 IPR000639 GO:0003824
Vifa3g05143 390 PRINTS Epoxide hydrolase signature 123 138 IPR000639 GO:0003824
Vifa3g05143 390 PRINTS Epoxide hydrolase signature 172 185 IPR000639 GO:0003824
Vifa3g05143 390 PRINTS Epoxide hydrolase signature 314 330 IPR000639 GO:0003824
Vifa3g05143 390 SUPERFAMILY alpha/beta-Hydrolases 88 366 IPR029058 -
Vifa3g05143 390 PRINTS Alpha/beta hydrolase fold signature 123 138 IPR000073 -
Vifa3g05143 390 PRINTS Alpha/beta hydrolase fold signature 186 199 IPR000073 -
Vifa3g05143 390 PRINTS Alpha/beta hydrolase fold signature 172 185 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05143 Vifa-Chr3 1500634038 1500637678 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05143 3 1500634038 1500637678 Vifa3g05143 3 1500634038 1500637678 ECH
Vifa3g05143 3 1500634038 1500637678 Vifa2g04476 2 1314189024 1314192319 PCT