Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05133 ATGGCTGATTCAGTCTCTTCCAAGAGAATGTGGTTTTCTATTCCTGAAAGGTTTCAACTGCATGTGGCCATGTTGGCCTTGCAGTTTGGTTATGCTGGTTTTCATGTTGTCTCAAGAGCTGCCCTTAACATGGGAATTAGCAAACTGGTTTTTCCTGTTTATAGGAACATCATTGCTCTCCTTCTACTTCTTCCATTTGCATATTTCTTGGAAAAGAAAGACAGGCCACCAATTAATTTCAACTTTCTCTGCCAATTCTTTTTTCTAGCACTTATTGGAATTACAGCAAACCAAGGTTTCTATTTGCTTGGTTTAGAGAACACAACTCCAACTTTTGCATCAGCAATACAAAATTCTGTCCCTGCCATAACATTTCTCATGGCTGTCATATTAAGGATAGAGCAAGTGAGATTGAATAGAAAAGATGGATTAGCTAAAGTTGCAGGAACAATATTCTGTGTAATTGGTGCAACAGTGATTACATTATACAAAGGTCCAACAATATATACTCCGAGTAATCACCTAAATAGTACTGCAACATTGATAACAGAAGTAACAACAACACCGATGATTGATTTTGGAACATGGTCTTTGGGTGATGCCAAGGGGAAAAACTGGACACTTGGTTGTGTTTATCTTATTGGACATTGTTTGTCTTGGTCTGCTTGGCTTGTGTTTCAAGCGCCTATTCTTAAGAAGTATCCTGCTCGTCTTTCTGTCACTTCTTATACGTGTTTCTTTGGTCTCTTGCAATTTCTTGTTATTGCTTTGGTTTGTGAAAGAAATTCTCAAGCTTGGCTATTTCACTCGGGTGGTGAAGCTTTCACTATTCTATACGCCGGAGTGGTGGCATCTGGAATTGCTTTTGCAGTACAAATATGGTGTATTGATAGAGGAGGTCCAGTGTTTGTTGCTGTTTATCAACCTGTTCAAACTTTTGTTGTTGCTATTATGGCTTCTATTGCTTTAGGAGAAGAGTTCTACTTGGGAGGGGTCATTGGAGCAATATTAATTGTAGCTGGATTATACTTTGTTCTGTGGGGTAAAAGTGAAGAGAAGAAATTTGCAAAAGAACAGCTTGCAATTGCATCATCAACTACAGAACATAGTAATATTATTAGGCCCACAAGTGCTGCTAAAGGATCATCACTTAATCAACCATTTCTCTCTTCAGAAAATGTTTGA 1185 0.3823 MADSVSSKRMWFSIPERFQLHVAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNIIALLLLLPFAYFLEKKDRPPINFNFLCQFFFLALIGITANQGFYLLGLENTTPTFASAIQNSVPAITFLMAVILRIEQVRLNRKDGLAKVAGTIFCVIGATVITLYKGPTIYTPSNHLNSTATLITEVTTTPMIDFGTWSLGDAKGKNWTLGCVYLIGHCLSWSAWLVFQAPILKKYPARLSVTSYTCFFGLLQFLVIALVCERNSQAWLFHSGGEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASIALGEEFYLGGVIGAILIVAGLYFVLWGKSEEKKFAKEQLAIASSTTEHSNIIRPTSAAKGSSLNQPFLSSENV 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05133 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Vifa3g05133 394 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 350 - -
Vifa3g05133 394 PANTHER WAT1-RELATED PROTEIN 22 359 IPR030184 GO:0016020|GO:0022857
Vifa3g05133 394 Pfam EamA-like transporter family 24 161 IPR000620 GO:0016020
Vifa3g05133 394 Pfam EamA-like transporter family 208 346 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05133 Vifa-Chr3 1494678195 1494680231 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05133 3 1494678195 1494680231 Vifa3g05133 3 1494678195 1494680231 ECH
Vifa3g05133 3 1494678195 1494680231 Vifa2g04452 2 1306396629 1306398713 PCT