Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05128 ATGGCAGCAGAAAATGAGGTGATCGGTGTTCATTCCGTTGAATCATGGAAGGAACTGATCCAGAAGGGAACTGAATCCAAAAAACTGTGCGGTCCGTGTCGTTTTATTGCTCCAATTCTAGCAGAGATTGCTAAGGAGACACCTGAAGTCATCTTCCTCAAGGTGGACATTGACGAATTAAAGAGTGTTGCAGAGGAATGGTCTGTCGAGGCTATGCCAACCTTCTTATTCTTGAAAGAAGGCAAGGAAGTGGATAAGGTAGTTGGTGCTAAGAAGGAAGAGCTGCAGCTGGCAATAACCAAGCATGCAACAGCTGTTGCTACTGCTTGA 330 0.4545 MAAENEVIGVHSVESWKELIQKGTESKKLCGPCRFIAPILAEIAKETPEVIFLKVDIDELKSVAEEWSVEAMPTFLFLKEGKEVDKVVGAKKEELQLAITKHATAVATA 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05128 109 CDD TRX_family 30 99 - -
Vifa3g05128 109 ProSiteProfiles Thioredoxin domain profile. 1 104 IPR013766 -
Vifa3g05128 109 Pfam Thioredoxin 29 99 IPR013766 -
Vifa3g05128 109 Gene3D Glutaredoxin 1 108 - -
Vifa3g05128 109 PANTHER THIOREDOXIN 7 101 - -
Vifa3g05128 109 SUPERFAMILY Thioredoxin-like 5 102 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05128 Vifa-Chr3 1493422801 1493423868 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05128 3 1493422801 1493423868 Vifa3g05128 3 1493422801 1493423868 ECH
Vifa3g05128 3 1493422801 1493423868 Vifa2g04446 2 1304446363 1304447088 PCT