Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05079 ATGGGTTCTCTGCAAGGACCAGTTGTGTGTCCCTCTGTTCATCCTAAAGTTGGAGGGTTTTGCAGCCTTTCTCTGATTGGGCCAATGAATGTAAGATGTGTTAGAACTGAGTTTTGGGGACTCAAGGAACTTAAGAGGGGGTTTCTTTCTTGTCAAGTAAAAATACGGAAGAGCGAGACTAAAGTGTGTTGTAGTTTAGATTCGTCGTCGAATGGTGGCGGAAGTATGTCAGATAGTTTCGATGAAAATGATGAAGATTATGTTAATTCAAGTGTGATTGAAGCTGTTGAGGTGAAAAGTGGCGCAGATGGTTTCATAATCAAAATGAGGAATGGAAGACACTTGAGATGTGTTCACAACAATCCTCAGGGGAGTCATCTTCCAGATTATTCACCACACCCCGCTATTGTTTTGAAGATGGAAGATGGGACTGGTCTACTTCTCCCTATAATTGTTTTGGAGATGCCAAGTGTCTTACTAATGGCGGCAATTCGCAATGTTCCAATTGCTAGGCCTACTTTATACCAAGCAGTAATGGAGATGATTGACAAAATGGGTTACCAAGTTAGACTTGTCAGGGTGACTAGGAGAGTCGATGAGGCATATTTTGCACAGTTGTATCTTACTAAGGTTGGAAATGAGGCAGAATGTAAAAGTTTTGATCTTCGACCTTCAGATGCTATCAATATCGCAGTTAGATGCAAGGTGCCAATACAAGTCAACAAGGGCTTGGTGTACAGTGATGGAATGAAAGTAATTGAATCAGGCAAACTGTCAATACAGATACCTAGTTTTGATGGCCGATTACTAACTGAAATGGATAAGCCAAATGGTCAGCCTTGTGCTGAAACCGACGAATTCAATCTTTTGAACAACATGATGAAAGCTGTTGTTGAAGAGCGCTACGATGATGCCGCATTGTGGAGGGACAAACTTAATCAACACAGGGCTGGTAAAAACATAAAGAAAAGGTCCTGA 978 0.4151 MGSLQGPVVCPSVHPKVGGFCSLSLIGPMNVRCVRTEFWGLKELKRGFLSCQVKIRKSETKVCCSLDSSSNGGGSMSDSFDENDEDYVNSSVIEAVEVKSGADGFIIKMRNGRHLRCVHNNPQGSHLPDYSPHPAIVLKMEDGTGLLLPIIVLEMPSVLLMAAIRNVPIARPTLYQAVMEMIDKMGYQVRLVRVTRRVDEAYFAQLYLTKVGNEAECKSFDLRPSDAINIAVRCKVPIQVNKGLVYSDGMKVIESGKLSIQIPSFDGRLLTEMDKPNGQPCAETDEFNLLNNMMKAVVEERYDDAALWRDKLNQHRAGKNIKKRS 325
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05079 325 ProSiteProfiles Bifunctional nuclease (BFN) domain profile. 117 252 IPR003729 GO:0004518
Vifa3g05079 325 Pfam Bifunctional nuclease domain 136 250 IPR003729 GO:0004518
Vifa3g05079 325 PANTHER VON HIPPEL-LINDAU PROTEIN 1 315 - -
Vifa3g05079 325 Gene3D Bifunctional nuclease domain 115 258 IPR036104 GO:0004518
Vifa3g05079 325 SUPERFAMILY Hypothetical protein TM0160 117 255 IPR036104 GO:0004518
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vifa3g05079 Vifa-Chr3 1479276348 1479278926 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05079 3 1479276348 1479278926 Vifa3g05079 3 1479276348 1479278926 ECH