Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05032 ATGACAAACTTGGTTTCTTGTTCCACATTTCTTGTTCTCTTTCTAGCATTCAACTTTGCATATTCTGACCCGTTCCTCGGAGTGAACTATGGACAACTCGCCGACAACCTTCCACCACCGTCAGCCACCGCGAAACTACTCCAAACCACCGCATTTGAAAAAGTCCGATTATACGGAACCGATCCTGCCATAATCAAAGCTCTAGCCAACACCGGGATCGGAATTGTAATCGGAGCTGCAAACGGCGACATACCAGCACTCAGTTCCGATCCATCTTTCGCAAAAACCTGGATAAACACCAACGTGATTCCCTATTATCCCGCTAGCAACATCATCCTCATAACCGTTGGTAACGAAGTGATAGATTCAAACGATACCAATCTTGTGAACCAGATGTTGCCGGCGATACAGAACATGCAAGGCGCACTTGAGGCGGTTTCTCTCGCTGGCAAAATTAAGGGTTTGTTGTCGTTTAACAAAGATACTGGTTCTCCTTTTGCTATTAACCCTTACCCTTATTTTGCTTACAAAAGTGACCCTGGAAGAGCAGATAATTTGGCTTTTTGCCTTTTTCAGCCCAACGCGGGCCGAGTTGACTCGAACACTAAGCTCAATTACATGAATATGTTTGATGCTCAGGTGGATGCGGTTCGATCTGCCTTAGATGCTATGGGTTTTAAGGAAGTTGAGATTGTAGTTGCGGAGACAGGGTGGCCATACAAAGGGGATCCCGATGAGGCTGGACCGAGTATTGAGAATGCAAAGGCTTACAACGGTAATCTCATTACACACCTGAGGTCCAAGGTTGGGACTCCCTTGATGCCGGGGAAATCAGTGGACACATACATATTTGCCTTGTATGACGAGGATTTGAAACCTGGAGCTGCTTCTGAGAGAGCCTTTGGGCTTTACAACCCTGATCAATCAATGATATATGACGCCGGCCTCTCGAAGCAAAGTTCTACTCCTACTAGCAGCCCCGTGGCTGCACCGACTCCGGAAGTGTCGAAAACTCCTGTGATTGCAGCACCAACAGGTCCAAGTTCTACACCAAAAGGCCGTAGTCCTACGCCGAGATTAACTGATGTGCAGCTACAAGCAAACTTAGATTATGCTTGTGGGCAGGGGATTGATTGCAGCTCAATCCAACCAGGAGGAGCTTGTTTCGAACCTAACACATTAGCAAATCATGCAGCATATGCCATGAATCTCTTTTATCACACTGGGCAAAATCCATTAACTTGTGATTTCTCACAGACAGCCACACTAACATCAAATAACCCAAGTTATAATAGTTGTGTTTATGCTGGAGGGAATGCATAG 1323 0.4611 MTNLVSCSTFLVLFLAFNFAYSDPFLGVNYGQLADNLPPPSATAKLLQTTAFEKVRLYGTDPAIIKALANTGIGIVIGAANGDIPALSSDPSFAKTWINTNVIPYYPASNIILITVGNEVIDSNDTNLVNQMLPAIQNMQGALEAVSLAGKIKGLLSFNKDTGSPFAINPYPYFAYKSDPGRADNLAFCLFQPNAGRVDSNTKLNYMNMFDAQVDAVRSALDAMGFKEVEIVVAETGWPYKGDPDEAGPSIENAKAYNGNLITHLRSKVGTPLMPGKSVDTYIFALYDEDLKPGAASERAFGLYNPDQSMIYDAGLSKQSSTPTSSPVAAPTPEVSKTPVIAAPTGPSSTPKGRSPTPRLTDVQLQANLDYACGQGIDCSSIQPGGACFEPNTLANHAAYAMNLFYHTGQNPLTCDFSQTATLTSNNPSYNSCVYAGGNA 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05032 440 FunFam glucan endo-1,3-beta-glucosidase 7 355 436 - -
Vifa3g05032 440 Gene3D Glycosidases 153 323 - -
Vifa3g05032 440 Gene3D Glycosidases 25 152 - -
Vifa3g05032 440 SMART X8_cls 355 435 IPR012946 -
Vifa3g05032 440 SUPERFAMILY (Trans)glycosidases 26 314 IPR017853 -
Vifa3g05032 440 Pfam X8 domain 358 422 IPR012946 -
Vifa3g05032 440 Pfam Glycosyl hydrolases family 17 154 313 IPR000490 GO:0004553|GO:0005975
Vifa3g05032 440 Pfam Glycosyl hydrolases family 17 26 153 IPR000490 GO:0004553|GO:0005975
Vifa3g05032 440 Gene3D - 351 436 - -
Vifa3g05032 440 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 152 424 IPR044965 GO:0004553|GO:0005975
Vifa3g05032 440 MobiDBLite consensus disorder prediction 316 358 - -
Vifa3g05032 440 MobiDBLite consensus disorder prediction 342 358 - -
Vifa3g05032 440 MobiDBLite consensus disorder prediction 316 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05032 Vifa-Chr3 1465714772 1465717302 Tandem