Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g05029 ATGGCTCAAAACTCAACTTCCGATACTCGCTTTCACGCTAACGCTGCAACTCCATTGCAGATCTCCAAAGATGTCCAAGGCTCTGACAATCCTATCCCACTTTCACCACAATGGCTTCTCCCAAAGCCAGGGGAGAGTAAATCTGGAACAGGACCTATGGAAAATCATGCGATCTCAAACCCATCACATGGCAGCCGCTCAGAGACTGTTAAGACATCTGGTGATGGAGAGGATGCACAGAAGAGAAAGGATGTCTTTAGGCCATCTATGTTTGACTCAGAGAATGGACGTCGTGATCGTTGGCGTGATGAAGAGAGAGACACTGAGAGAGACACAAAGTCCTCCATCCGTAAGGATCGTTGGAGGGATGGGGACAAAGACCTAGGTGATTCACGGAAGGTGGATCGATGGGGAGAAAATCCAGCTCCAAAGAATTTTGGAGAAACACGTCGTGTTACAGCTGATACTCATAGGTGGAATGATTCAGGAAACCGAGAAGCTAACTTTGATCAGCGGCGTGAGAGCAAGTGGAACACACGCTGGGGTCCTAATGAGAAGGAGCCAGAAGGTGTTCGTGAAAAATGGAGTGACTCAGGAAAAGACGGTGATATACATCTGGATAAAGGTTTGTCTCATGGGAAGGATGAGAAAGAAGGAGATCAAGTTCGACCATGGAGACCTAACTTCGCACAAAGCCGTGGGAGGGTAGAGCCTCCTCATTCCCAAAGCACACCACCAAACAAACAAGCCTCTACATTTTCCTATGGCCGTGGTCGTGGAGAGAATACACCCCCGCCAGTCTTCAGTCCTGGACTAGGCCGTGGTGGTAGCTCTTTGAATAGCACATATCCTGGATCTGCATTAGACAAAGTCGAAAGTGAACATGAAGAACCTTTTAGATATAACAGGACAAAATTGCTTGATGTATACAGAGTGACTAATATGGGTCGAAATAGAAATCTTGTTGATGATTTTGTGCAAGTACCAAGTCTTACACATGATGAATCATTGGAGCCTCTTGCTCTTACGACACCAAATTCTGAGGAACTGTCTGTCTTAAATGGTATTGAAAAAGGGGAAATAGTTAGTAGTAGTGCACCTCAAGTGTCCAAAGAAGGAAGGGGCTCAACAGATTTTACTCAGACTAGACGAATGAAGCCTGGAATCACTCCTCTTCAAGATAGAAGTGAAGATGGTGGTTCTTACAAAGTGGCTGATGAATTGTCCAGTAATAGAGATTCATCCTTTGAAGGAAATAGCTCTCCTCATCCTGGTGCTGCATGGCGAGCAACGCCAGCAGGTGAACATACAAGTGCTCTATTGCACAATAGCAGGGATGTATCTAGTGATGCTAGACTAAGAAAATCAGATGTGAATTCACACCAGCCAAAAGATTCTCAAAGTCCATGGGAAAGTAAGTTGGGTTTTGTATCTGAGTCTAAAGAAGTAGGTAAGTGGCACACTAGTAGTGAAGATCCTATTGTTAAGAGGCAGCTATCTGGTGTTTTGGAAAGTGAACTTGGAGCCAGAAGAGTTCCTCCGACTGCTCCAGAGGAGTTATCCCTTTTGTATAAAGATCCCAAGGGTCTAATCCAAGGTCCATTTAAAGGAATTGACATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTACCTGTTCGTCTGGAAAATTCAGCAGTTGACTCACCATGGTTTTCTCTTGGTGATGTCATGCCGCATTTACGAGCTAAAGCCCGACCGCCACCAGGATTTTCTGCTCCACAACCGAATGAATCGGCAGATATGACTGCTCGCCAAAATCCTACTACATTTGGAAATACCCTCACTGGTTTGAATGAGGTTGAGATGTTGAAAAGTGATTCTAGGCATCGGCAGGGTTCTGGTACCGGAGTTGAAAGTAGGTATCTGGAGTCACTCATGTCTGGTAACAGAAGTGGTCCTACAATTAACAACCTTGCATTATCAGAAGGTTTTAAAGGGTTTGCTGGGAATAATTCTGGTAATCTGGGCCCAACGGGAGTAGATAATGGTAACAACATTTACTTGCTCGCCAAAAGGATGGAGCTTGAACGCCAGATGTCCTTACCCAATTCATATCCATATTGGCCGGGGCAGGATGCGGCATCCCTTGCTCCAAAATCAGATGTCCCAGATGCGTCGCTGCATTCAAAGCTTTTGTCTTCAGCGAGTGACAATTCACGTCAACCTCAGTCTCAAAATTCTGAGTTATTGTCAATAATCCAAGGGTTATCTGACAGAACATCTGCAAGCATAAATAGTGGTCCTGGATGGCCAAATAATCCCATACAAGGTGGATTAGATCTCCTTCAGAATAAAATTGACTCAGTTCATGATCAGAATTTCTCTCAAATGCCATTTGGAATTCAGCAGCAAAGGCCGACATTGCAAAATCAGCTTTCTTTAAGCAATTTACTGGCTCTAGCTGGGGATAACCCAGCTAGTTCTTTGACAGCAGAGAAGCTACTTTCTTCTGGTTTAGCTCAAGATCCACAAATAATGAATCTGTTGCAACAACAATACTTGTTGCAGTTACATTCTCAAGCAGCTGCTTCAGCACCGCAGCTTCCCTTGTTAGATAAACTCCTGCTGCTAAAGCAGCAGCAGAAGCAGGAAGAGCAGCAGATGTTCTTAAGGCAACAACAGCAACAACTGCTTTCCAAAATGTTGCAGGACCAACAGTCTAGCCAGCTCTTTGGCAATTCATCTTATGGACAGTTGCCAAGTTCATTACCAATGGGAAATTTGCGTGTTGATCCTTCTCAACTTCAAACCCCACAAGATGCTTTTCCTATGAGCTCCCAGATGCCAATTCCTAGTGTGCATAATGAACTTAGTACTGATTCTATGAATTTGCATCTTAATGTCAGCCAAGACGCAAGTTATACAGTTGGCAGTAAGGGGTCTACCGTGCGTCTGCCTCATCAGGTATTTGGGGATACTAGTCCTCAGAATAACTGGGTTCCTACTCCCGCTGAGCTAATTAATGAAAATCATAATAAAGAACCTCCAGCTCCTTATGTTGCGAGTTCACTTGTGCATGACCTGAACAGCTCCAAAGAGGCACCCCACATTGTGCAGGATTCTGTTTTTGACTATACTGCTAAATATTCGAAGCAGGTACAGGACAGCACCTTAAGATCTGATGGTGTTGCCATACCGGCAATATCTATGCCTTCTGTACATTTACAGCATGATGCACCTCCTGTTGATAAATCTTCAACAGGATCTAGTGGGATTGAATTACCCCCAGCTAGTTTGGCTGAAATATACAGCTCCAATGCTGTGGAAGTTGAAACACATGAACCCAAAAAGGCTACCGAGAAGAAATCTAAGAAGCAAAAATCTAACAAACCTCAATCTTCTGACCAAGCAAAGGGATTGCTAAAAAACATGACTTTGCAGCCATCAAAGCAGTCAGAAATTGAAATACCTCATTTTAATGAGTTGGGGGAAACAAACAATGCTGGATCACATGAAACATATCTGCAAAAAACAAGAAGTAAAGCTAGTCATATTGAAGAAAATGCTATACTAGAGACAGCTGATCATCAAGATGTCAGTGTTACTAGAAACATCACTGAAACAATCCTTTCAGGCGATTCTGTGGCAGTTGGTTCTGTTTCTACTCACAATGCTGAAGCTCCTGCTGGACGAGCTTGGAAACCTGCTCCAAGTGTCAAGGCCAAGTCTTTATTAGAAATTCAGCTGGAAGAACAGAGAAAGGCACAGACAGAAACACTTGTATCTGATGTTGCTGCTTCTGTCAATTCCTTGAGTTTGGCAACGCCATGGGCTGGGGTTGTATCATATCCAGACTTGGTTAAGGTATCTAGTGAAAGTCATGCAGGAGACAATACAGAATATCCTTTTAATTCTCAAACTTCTCAGAATATGAAGATCAAGAAAAGTCAGTTGCATGATCTATTAGCTGAAGAAGTTTTGAAAAAGTCTAATGAAACAGATGCGGAGGTTCCAGATAAGACATTGTCTTTGAACGATATTGCTGTGCAATCAGAGTCAATAAATAGTAGTAACTTCATTGAGGCAAAAGATACTAAAAGAAGCCGCAAGAAGTCAGCAAAGAAGGGTTCGGGAGTTAAAGCCCCAGTTTCTGCCGTGTCTGCTGAAGTACCCATATCTTCAAGCCCTATTGAAAAAGGTAAAAGTTCTCGATCTGCACAGCAAGAAAAAGAAGCATTGCCTTCAATCCCAGCTGGACCCTCTCTGGGGGACTTTGTTCTTTGGAAAGGAGAGCGAGATCAGCCCATCCCATCTCCTTCTCTAGCATGGTCTTCTGATTCTGGCAGAGTCCCTAAACCAACTTCTTTAAGGGACATTCTGAAGGAGCAGGAGAAAAAGGCTTCTTTTGCAGTTCCTGCGAGTCCGGTGCCTATGCCTCAGAAAGCTCAGCCTCCTACCCAGGCTAATTGGAATAGTGCTTCTTCACGGCCAATCTCAGCTTCCTCTCCATCTAAAGCTGCCTCACCACTTCCGGTAAACTCGCATGCTTCCAACCAATCAAAATACAAAGGGGATGATGACTTGTTCTGGGGTCCAATTGAACAATCCAAGCAAGAAACTAAGCAGACTGCTTTCCCTCAGCTGGCTAGTCAGGGAAGCCGGGGATCAAAAAATATACCATTGAAAGGTAGTTCTCCGGGATTATTAACCCGACAGAAATCAGCAAGTGGCAAGCCAACTGAGCGACCCCTATCATCATCACCCGCCTCTTCTCAATCGGTGCTGAAACTGAAAAGAGATGCTATGACTAAGCATTCTGAGGCCATGGGCTTCAAAGATTGGTGTGAGAATGAGTGTGTTAGGCTTATTGGGACAAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCAGAAGCTGAGACGCTTCTAAAAGAAAATCTTGGATCGTTTGACCCTGACCATCAATTCATTGACAAATTCCTCAATTACAAGGAGATGTTACCATCAGATGTGTTGGACATAGCTTTCCAGAGCAAGCATGGTAAGAAAGTTAATGGACTTGGCTCTGCTCCCATGGCTTCAACTAATGCAGACATACAGGACGTGGACCAAACTGAAGGATCCTCCAAAGGAGGTGGGAAGAAGAAAGGCAAAAAAGGGAAGAAGGTTAGCCCTTTAGTTTTGGGATTTAATGTTGTGAGCAACCGGATCATGATGGGTGAGATCCAGACTGTAGAAGATTAG 5241 0.4383 MAQNSTSDTRFHANAATPLQISKDVQGSDNPIPLSPQWLLPKPGESKSGTGPMENHAISNPSHGSRSETVKTSGDGEDAQKRKDVFRPSMFDSENGRRDRWRDEERDTERDTKSSIRKDRWRDGDKDLGDSRKVDRWGENPAPKNFGETRRVTADTHRWNDSGNREANFDQRRESKWNTRWGPNEKEPEGVREKWSDSGKDGDIHLDKGLSHGKDEKEGDQVRPWRPNFAQSRGRVEPPHSQSTPPNKQASTFSYGRGRGENTPPPVFSPGLGRGGSSLNSTYPGSALDKVESEHEEPFRYNRTKLLDVYRVTNMGRNRNLVDDFVQVPSLTHDESLEPLALTTPNSEELSVLNGIEKGEIVSSSAPQVSKEGRGSTDFTQTRRMKPGITPLQDRSEDGGSYKVADELSSNRDSSFEGNSSPHPGAAWRATPAGEHTSALLHNSRDVSSDARLRKSDVNSHQPKDSQSPWESKLGFVSESKEVGKWHTSSEDPIVKRQLSGVLESELGARRVPPTAPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAVDSPWFSLGDVMPHLRAKARPPPGFSAPQPNESADMTARQNPTTFGNTLTGLNEVEMLKSDSRHRQGSGTGVESRYLESLMSGNRSGPTINNLALSEGFKGFAGNNSGNLGPTGVDNGNNIYLLAKRMELERQMSLPNSYPYWPGQDAASLAPKSDVPDASLHSKLLSSASDNSRQPQSQNSELLSIIQGLSDRTSASINSGPGWPNNPIQGGLDLLQNKIDSVHDQNFSQMPFGIQQQRPTLQNQLSLSNLLALAGDNPASSLTAEKLLSSGLAQDPQIMNLLQQQYLLQLHSQAAASAPQLPLLDKLLLLKQQQKQEEQQMFLRQQQQQLLSKMLQDQQSSQLFGNSSYGQLPSSLPMGNLRVDPSQLQTPQDAFPMSSQMPIPSVHNELSTDSMNLHLNVSQDASYTVGSKGSTVRLPHQVFGDTSPQNNWVPTPAELINENHNKEPPAPYVASSLVHDLNSSKEAPHIVQDSVFDYTAKYSKQVQDSTLRSDGVAIPAISMPSVHLQHDAPPVDKSSTGSSGIELPPASLAEIYSSNAVEVETHEPKKATEKKSKKQKSNKPQSSDQAKGLLKNMTLQPSKQSEIEIPHFNELGETNNAGSHETYLQKTRSKASHIEENAILETADHQDVSVTRNITETILSGDSVAVGSVSTHNAEAPAGRAWKPAPSVKAKSLLEIQLEEQRKAQTETLVSDVAASVNSLSLATPWAGVVSYPDLVKVSSESHAGDNTEYPFNSQTSQNMKIKKSQLHDLLAEEVLKKSNETDAEVPDKTLSLNDIAVQSESINSSNFIEAKDTKRSRKKSAKKGSGVKAPVSAVSAEVPISSSPIEKGKSSRSAQQEKEALPSIPAGPSLGDFVLWKGERDQPIPSPSLAWSSDSGRVPKPTSLRDILKEQEKKASFAVPASPVPMPQKAQPPTQANWNSASSRPISASSPSKAASPLPVNSHASNQSKYKGDDDLFWGPIEQSKQETKQTAFPQLASQGSRGSKNIPLKGSSPGLLTRQKSASGKPTERPLSSSPASSQSVLKLKRDAMTKHSEAMGFKDWCENECVRLIGTKDTSFLEFCLKQSRSEAETLLKENLGSFDPDHQFIDKFLNYKEMLPSDVLDIAFQSKHGKKVNGLGSAPMASTNADIQDVDQTEGSSKGGGKKKGKKGKKVSPLVLGFNVVSNRIMMGEIQTVED 1746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 363 431 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1071 1090 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 150 223 - -
Vifa3g05029 1746 Pfam GYF domain 524 566 IPR003169 GO:0005515
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1103 1136 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1356 1592 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1384 1406 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1479 1515 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 235 258 - -
Vifa3g05029 1746 Gene3D - 507 587 IPR035445 -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1 33 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 52 69 - -
Vifa3g05029 1746 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1746 - -
Vifa3g05029 1746 ProSiteProfiles GYF domain profile. 519 570 IPR003169 GO:0005515
Vifa3g05029 1746 SMART gyf_5 520 575 IPR003169 GO:0005515
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 363 387 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 443 474 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 407 421 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 447 461 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1688 1706 - -
Vifa3g05029 1746 CDD GYF 519 576 IPR003169 GO:0005515
Vifa3g05029 1746 SUPERFAMILY GYF domain 512 576 IPR035445 -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1531 1592 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1686 1721 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 70 139 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1106 1127 - -
Vifa3g05029 1746 MobiDBLite consensus disorder prediction 1 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g05029 Vifa-Chr3 1465031483 1465039859 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g05029 3 1465031483 1465039859 Vifa3g05029 3 1465031483 1465039859 ECH
Vifa3g05029 3 1465031483 1465039859 Vifa2g04379 2 1287063890 1287072243 PCT