Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04972 ATGGGTGAAACTGATAACCACAACCACCAAGCACCACCGTCGGCACCACCACCGCAGAATCTGGGACTTTCATTGGGACCTACTTGGACTCCAGCTGAACAGCTTCTTCAACTTCATTATTGCATCCATTCTAATCCTTCATGGCCGGAAGCATTGCTTTTGGGTTTTCAGCACTACATTGTGATGCTTGGAACAACGGTTCTAATTGCAACCAATCTTGTACCTCAAATGGGTGGGAGTCATGGCGATAAGGCACGTGTGATTCAGACATTGTTGTTTATGTCGGGCATCAACACATTGCTTCAAACTTGGTTTGGTTCGAGACTTCCGGTGGTAATGGGGGGATCACTTGCTTTCGTACTTCCAGTGATGTCGATCATCAATGATTACAATGACCAGACTTTTTCATCTGAGCACGAGAGGTTTACTCGCACAATGAGAACAATTCAAGGATCCCTCATTGTTTCATCTTTCATCAATATCTTCCTTGGATATAGTAGGGCATGGGGAAATTTAACAAGGTTGTTTAGTCCCATTATCATTGTACCTATTGTATCTGTTGTCGGTCTCGGTCTCTTCACGAGGGGCTTTCCGTTGGTTGCGGATTGTGTGCAAATTGGACTACCTATGCTCATTCTACTAATCATAACACAACAGTATTTGAAGCGCCTTCATCCTCAAGCTCATCATATACTTGAGAGGTTTGCTTTACTTATCTGCATTGCCATTATTTGGGCTTTCGCCGCTATCCTTACCGTTGCTGGTGCATACAATAATTCCAAATCAAAGACCCAAACAAGTTGCCGCACAGATCGCTCCTACCTTTTGACTTCTGCTCCTTGGATTAAAGTTCCATACCCATTTCAGTGGGGTACCCCCATATTCAAGGCTAGTCATGTCTTTGGGATGATGGGAGCAGCACTTGTCTCTTCTGCTGAGTCAACTGGTACTTACTTCGCTGCAGCCAGGCTTTCTGGTGCAACACCCCCTCCTGCACATGTGTTCAGCCGAAGCATCGGACTCCAGGGCATTAGCATGCTGATTGAAGGCATTTTTGGGTCAGTTGTCGGAACTACGGCATCAGTCGAAAACGTTGGTCTGCTCGGTCTCACTCATATCGGGAGCAGAAGGGTGGTGCAAATATCATGTGGTTTCATGATTTTCTTCTCTATTTTCGGTAAATTCGGCGCCTTTTTTGCATCGATTCCCCTACCAATATTTGCTGCTATATACTGTGTTTTATTTGGCATTGTTGCTGCTACTGGGATTTCATTCATACAATTTGCAAACAACAATTCCATAAGAAATATCTATGTTTTCGGCTTAACCCTATTTCTCGGGATCTCAATTCCTCAATATTTTGTCATGAACACGGCACCTGACGGTCACGGTCCTGTTAGAACAAACGGCGGATGGTTTAATGACATACTGAACACAATATTCTCATCTCCACCAACTGTGGCAATAATAGTTGGAACTATCGTTGACAACACACTTGAAGCAAAACAAACAGGTGTTGATAGAGGACTTCCATGGTGGGTTCCTTTCCAAAATAGAAAGGGAGATGTTAGAAATGATGAATTTTATCGATATCCGCTTAGGTTAACTGAATATATTCCTACCAGATTTCTAGATTAA 1638 0.4347 MGETDNHNHQAPPSAPPPQNLGLSLGPTWTPAEQLLQLHYCIHSNPSWPEALLLGFQHYIVMLGTTVLIATNLVPQMGGSHGDKARVIQTLLFMSGINTLLQTWFGSRLPVVMGGSLAFVLPVMSIINDYNDQTFSSEHERFTRTMRTIQGSLIVSSFINIFLGYSRAWGNLTRLFSPIIIVPIVSVVGLGLFTRGFPLVADCVQIGLPMLILLIITQQYLKRLHPQAHHILERFALLICIAIIWAFAAILTVAGAYNNSKSKTQTSCRTDRSYLLTSAPWIKVPYPFQWGTPIFKASHVFGMMGAALVSSAESTGTYFAAARLSGATPPPAHVFSRSIGLQGISMLIEGIFGSVVGTTASVENVGLLGLTHIGSRRVVQISCGFMIFFSIFGKFGAFFASIPLPIFAAIYCVLFGIVAATGISFIQFANNNSIRNIYVFGLTLFLGISIPQYFVMNTAPDGHGPVRTNGGWFNDILNTIFSSPPTVAIIVGTIVDNTLEAKQTGVDRGLPWWVPFQNRKGDVRNDEFYRYPLRLTEYIPTRFLD 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04972 545 Pfam Permease family 51 454 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vifa3g04972 545 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 32 540 - -
Vifa3g04972 545 NCBIfam purine/pyrimidine permease 52 457 - -
Vifa3g04972 545 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04972 Vifa-Chr3 1444831346 1444835162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04972 31 540 Organic Solute Cotransporters AT2G34190 57.647 0.0 627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04972 3 1444831346 1444835162 Vifa3g04972 3 1444831346 1444835162 ECH