Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04926 ATGCAAGCTTGGGGGAGGTTAGGAGGTTACATAAGACGCGGTGTGTGCAATGTTTCTGGGCCGTTTCTTCCGTTCGGGGGGGCTGTTGATATTATTGTTGTTCAGCAGAAAGATGGGAGCTTTAAATCATCTCCTTGGTATGTTAGGTTTGGAAAATTTCAATGGGTTATGAAGGCGGCGAAGAGGGAGAAGGTTAAGGTTAGTGTTAGTGTTAATGGGGTTGAAACTGATTTTCATATGTGTTTGAGTCCTAAAGGGGACGCTTTTTTTCTTCATGGGAATTCTTCGCAACATGGTGAAGGAGAAGAAGGACAAGAGGAACAAGAAGAAGGAGAAGATGGGATAGAGTCTATGTGGTGTTATGATGATATTCAAGTGAGAGGTAGTAATAAGAGGCAATTCAAGTCGAAAAGTTGTAACTTTCGTTCTGAGGATCCGATTGTAGATAGGACTGGTTCTCGCCGTTCGAGAATGTGTAGGCTTGTATTTGGGCCGAGTTCTGATGGTGGTGATGGTGAAGATGTTGATGCAGATTTAGTGGAGCGTGCTGAAATTGCTGCGAAGTTGTTGGATTTAAGGTGGTCTACTAATCTCACTTTTGATGAACTTCCCTATCGGGAAGGAAAGAAGACTCGAGGTGGTAACTTGGACAAGGGGAAAGGCAAGACTGTATCTGATAAGGTTTTTCACCTTGCAAATGAAGTATGTGGAGAGGTTCGTGTCCATGATGAGGTTTTGCACGCTACAGCTCTGCAGCTACCTGAGGGTGGAAAACCTGAGGGAATTACTACGAGTGTCCATCTCGAGAGGCCGGTAACGGGTTGTGGTATTTGTGATGTTGTGGATGTTGGAACCAGGGCAAAGTTTCAAAAATCTCAGACTGTCAATATTGGTAGAAGGGATCGTTCTGTTAAGAAGGTTAGCGTAAATACTCCAACGTCTGAACAACTGTCATCCTTGAATCTGAAGGAAGGGAGAAACACGATAACCTTCGGTTTCTCTACACCTATGATGGGGATGCGGCAGATTGATGCTCGAATATTTTTGTGGAAATGGAATACTCGTATAGTGATATCAGATGTGGATGGAACAATTACAAGGTCAGATGTTCTAGGTCAGTTCATGCCTTTAGTTGGGATTGACTGGTCACAGACTGGTGTTGCTCATTTATTTTCAGATATCAAGGAAAATGGCTACCAGTTACTTTTTCTCAGTGCTCGTGCAATTTCTCAAGCACATAACACCCGACAGTTTCTATTCAACCTTAACCAGGACGGGAAAGTCTTACCAGATGGTCCAGTTGTTATTTCCCCCGACGGACTTTTTCCTTCTTTATATAGAGAAGTTATCCTCAGGGCTCCACACGAATTCAAAATTGCATGTTTAGAGGACATCAGGGCACTTTTTCCTCCTGATTGCAATCCGTTCTATGCTGGTTTTGGAAATAGAGATACTGATGAAATCAGCTACCTTAAGGTTGGAATCCCAAAAGGAAAAATATTCATTATTAATCCCAAGGGTAAGATTTCTATAAACCGACGGTGTTTAGACACAAATTCATACACTTCTCTTCACACTCTCGTGAATGGAATGTTTCCCCCTACAAACTCATATGAGCAGGAGGATTACAATTCATGGAACTTCTGGAAGTTGCCCCCTGTCTAA 1665 0.4276 MQAWGRLGGYIRRGVCNVSGPFLPFGGAVDIIVVQQKDGSFKSSPWYVRFGKFQWVMKAAKREKVKVSVSVNGVETDFHMCLSPKGDAFFLHGNSSQHGEGEEGQEEQEEGEDGIESMWCYDDIQVRGSNKRQFKSKSCNFRSEDPIVDRTGSRRSRMCRLVFGPSSDGGDGEDVDADLVERAEIAAKLLDLRWSTNLTFDELPYREGKKTRGGNLDKGKGKTVSDKVFHLANEVCGEVRVHDEVLHATALQLPEGGKPEGITTSVHLERPVTGCGICDVVDVGTRAKFQKSQTVNIGRRDRSVKKVSVNTPTSEQLSSLNLKEGRNTITFGFSTPMMGMRQIDARIFLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLFSDIKENGYQLLFLSARAISQAHNTRQFLFNLNQDGKVLPDGPVVISPDGLFPSLYREVILRAPHEFKIACLEDIRALFPPDCNPFYAGFGNRDTDEISYLKVGIPKGKIFIINPKGKISINRRCLDTNSYTSLHTLVNGMFPPTNSYEQEDYNSWNFWKLPPV 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04926 554 SMART lns2 356 512 IPR031315 -
Vifa3g04926 554 Pfam LNS2 (Lipin/Ned1/Smp2) 311 533 IPR013209 -
Vifa3g04926 554 Pfam lipin, N-terminal conserved region 25 97 IPR007651 -
Vifa3g04926 554 SUPERFAMILY HAD-like 349 498 IPR036412 -
Vifa3g04926 554 PANTHER LIPIN 296 553 IPR026058 -
Vifa3g04926 554 MobiDBLite consensus disorder prediction 94 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04926 Vifa-Chr3 1430822213 1430828225 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04926 3 1430822213 1430828225 Vifa3g04926 3 1430822213 1430828225 ECH