Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04918 ATGGAGGAAGTTGAAAACAAACCAACCTCAGAATCCTCTTCAATAAATGCCGAACAAAATCCACGAGGCGAAACCTCTCAAGAAAATACTGACGATATTATAGCTCCAATCAATAATCAATCTTCCGTTGAAGCTTCCATCAACTCTCTTGGTGATAACAATATACCAGAACATGATGACACTCATTCTCCAGCAGCGACCGATTTCCCTGAAATAGAATCGAACTCAACAAATGTTTCCATTGATCAACCTATAAAACAAGATGAATATCTTCTCATAACAGATAATTCAACTTCAACCTCACAAGAAACGGAACAAATCCACCAAGAATCGATAGCTGAAGATTCTGAACCTGAAGCCTTAGAAGATATAAATAACAGACAACAAGATGGTGGTTCAACTGCTACCGCTAGCGGCAACGTTGATAATCTTGTTACGGAGCCCTCAACATCCTCTTCTGGAACAAACGAGTTGCCGATTGAACCTATAGATTCACCTCGAGACGGAGTTATTGATGCCCCTCTAGAAAATTTAGTTTCAACCTCATTTTCTGAAGTTCATGTAACAGAAGAAAGTCACCAAGAACCTATAGTTACAGATTCCGAATCAGGATCTTTAGAAGATATAGTGAATGAGAAGAATGGCGATTCTACGGTCAGCGTTATTGATAATCACATTGAACATGAATCAGGAGCTTTAGAAGATTTAGTGAACACGGAGAGAGATAGGGATTCTATTGTCAGTGTTGTTGATAGTCAGATCGAACATGGATCGAGATCTTCAGAAGATATAGTGAACATGGAGAAAGATGGTGATTCTACTGTCAGCGTTGTTGATAATCAGATTGAACTTGAATCGGGATCTTTAGAAGATATAGCAAACACGGAGGAGGGTGATTCTACTGTCAGCGTCGTTGATAATCAGATTGAGCTATCGGCTTTGTCGTCTGAAAAAATAGAGTTGCAGAATGATCGTGAAGAACTAAACGTAAATCTGGATGAAATCAAGGTTTCTGATGTTGCTGTTGGAAGAGTCGAGTCACCTACAAATGAGAAGGAAATCGAGGAAAAAAGAGGCATAATTGATACAGCAGCTCCATTTGAATCTGTTAAAGAAGCTGTTTCTAAATTCGGAGGAATCGTCGATTGGAAGGCTCATAGAATGGTGACAGTCGAGCGGCGCAAGAAAGTAGAGCAAGAGCTTGAGAAAGCACACGACGAGATTCCGGAGTATAGGAAAATATCGGAGGCTGCCGAGCAAGAAAAAGTCCAAGCACTTCAGGAGCTTGACAGCACGAAAAGACTAATAGAAGAGCTTAAGCTGAACCTAGAGAGAGCGCAGACCGAAGAGCGTCAAGCAAGACAAGACTCGGAACTCGCAAAGCTTAGAGTGGAAGAGATGGAGCAAGGTATTGCTGAAGATTCCAGTGTGGCAGCCAAGGCGCAGCTTGAGGTAGCGAAAGCCAGGTATACGGCTGCCATTACCGAGTTTACGTCGGTGAAACATGAGCTTGATTCGTTGTGTGTGGAATACGCTTCCTTAGTTGATGAAAAAGGCGAAGCTATTAACAGAGCCGAAGAAGCTGTTGCTGCGTCAAAGCAAGTAGAAAAGATGGTAGAAGATTTGACAATTGAGCTGATTGCCACAAAAGAGTCTTTGGAAACCGCACATTCTGCGCATATGGAAGCAGAAGAACACAGAATAGGAACAGTCATGGCAAGAGATCAAGATTTACTCAATTGGGAGAAGGAACTTAAACAAGAAGAACACAAATTAGAAAAATTCAACCAGAAAATTTTGTCGGCTGAGGGTCTTAAATCTAAACTGAGTAAAGCTTCTACATTGCTTCTCGATTTGAAATCCGAGTTAAATGCCTATATGGAATCTAAGTCAAACCAAGAAGGCGGCGATGAAGAAGGAGTCTCGAAAGCGGAACTGGAGAAAAAATCACACAACGAAATACAAGAAGCAATTGCATCGGCGAAAAAGGAACTTGAGGAAGTAAAGCTTAACATAGAGAAAGCTACTTCCGAGGTAAATTACTTAAAGGTGGCTGCAACATCGTTAAGATCAGAACTCGATCAAGAAAAATTGTCGCTTGCGTTGATTAGGCAAAGAGAAGGAATGGCTTCTGTTACAGTCGCGTCTATTGAAGCCGAGCTGAACAAAACCAAAACCGAAATCGGTTTCGTTCATATTAAGGAAAAAGAAGGCAGAGAGACAATCCTTGAAATGCCGAAGAAACTAAAAGAAGCAGCGGAAGAGGCTAATAAGGCAAACTTGCTTGCTAAAGAAGCTCGTGAAGGGCTTCGGAAAGTAAAGGAGGAAGCAGAACAAGCCAAGGCGAGCGCAAGTACAGTGTATAGTAGATTACTTGCAGCGCAAAAGGAGATAGAAGCCGCAAGAGCTTCTGAAAGGTTGGCAATAAAAGCAATTAAAACATTGCAAGAGAGCGAATCAGCTAGAAGCAACAACAAAAATGAAGTGGATTCATTGAATGGTGTTAAACTATCGGTCGAGGAGTACTATAATCTTACCAAACAAGCTCATGAAGCAGAGGAGGAAGCCAATGTGAGAGTTGCAACCGCGAATTCTAAGATAGATACAGCTAAGGAGACTGAATCGAAAACTTTGGAGAAGTTGAATGAAGTGAACAAAGAAATGGCTGCTAGAAGAGAATCTTTGAAGATTGCAATGGGCAAAGCTGAGAAGGCAAGGGAAGGAAAATTAGGTGCAGAACAAGAATTAAGAAAGTGGAGAGCCGAACACGGGCAACGAAGAAAAGCCGGCGAAATAGGCCAAAAAGTGGTGAACCAGAATACAAGCCATAGTGGTAAACTCGAACAAAATAATAGGGGAAATATTCCTCCTGGACATCACTTTTCGAGTCAAAAGTCTTATGTTCGCGCGAACAATGAAAATGGATCATCGCCGGATGCGAAAAACGGAAAGAAGAAGAAAAAGTCGTTTTTTCCGCGGGTTTTTATGTTCTTTGCAAGAAGAAAATCACATTCAACTCATTAA 3024 0.4137 MEEVENKPTSESSSINAEQNPRGETSQENTDDIIAPINNQSSVEASINSLGDNNIPEHDDTHSPAATDFPEIESNSTNVSIDQPIKQDEYLLITDNSTSTSQETEQIHQESIAEDSEPEALEDINNRQQDGGSTATASGNVDNLVTEPSTSSSGTNELPIEPIDSPRDGVIDAPLENLVSTSFSEVHVTEESHQEPIVTDSESGSLEDIVNEKNGDSTVSVIDNHIEHESGALEDLVNTERDRDSIVSVVDSQIEHGSRSSEDIVNMEKDGDSTVSVVDNQIELESGSLEDIANTEEGDSTVSVVDNQIELSALSSEKIELQNDREELNVNLDEIKVSDVAVGRVESPTNEKEIEEKRGIIDTAAPFESVKEAVSKFGGIVDWKAHRMVTVERRKKVEQELEKAHDEIPEYRKISEAAEQEKVQALQELDSTKRLIEELKLNLERAQTEERQARQDSELAKLRVEEMEQGIAEDSSVAAKAQLEVAKARYTAAITEFTSVKHELDSLCVEYASLVDEKGEAINRAEEAVAASKQVEKMVEDLTIELIATKESLETAHSAHMEAEEHRIGTVMARDQDLLNWEKELKQEEHKLEKFNQKILSAEGLKSKLSKASTLLLDLKSELNAYMESKSNQEGGDEEGVSKAELEKKSHNEIQEAIASAKKELEEVKLNIEKATSEVNYLKVAATSLRSELDQEKLSLALIRQREGMASVTVASIEAELNKTKTEIGFVHIKEKEGRETILEMPKKLKEAAEEANKANLLAKEAREGLRKVKEEAEQAKASASTVYSRLLAAQKEIEAARASERLAIKAIKTLQESESARSNNKNEVDSLNGVKLSVEEYYNLTKQAHEAEEEANVRVATANSKIDTAKETESKTLEKLNEVNKEMAARRESLKIAMGKAEKAREGKLGAEQELRKWRAEHGQRRKAGEIGQKVVNQNTSHSGKLEQNNRGNIPPGHHFSSQKSYVRANNENGSSPDAKNGKKKKKSFFPRVFMFFARRKSHSTH 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 628 649 - -
Vifa3g04918 1007 Coils Coil 867 898 - -
Vifa3g04918 1007 Coils Coil 902 922 - -
Vifa3g04918 1007 Coils Coil 394 465 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 934 978 - -
Vifa3g04918 1007 Pfam Weak chloroplast movement under blue light 358 926 IPR008545 -
Vifa3g04918 1007 Coils Coil 525 545 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 632 649 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 1 213 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 68 107 - -
Vifa3g04918 1007 Coils Coil 644 685 - -
Vifa3g04918 1007 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 359 1002 - -
Vifa3g04918 1007 Coils Coil 311 338 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 198 213 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 108 124 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 8 54 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 126 159 - -
Vifa3g04918 1007 Coils Coil 578 605 - -
Vifa3g04918 1007 Coils Coil 749 783 - -
Vifa3g04918 1007 MobiDBLite consensus disorder prediction 920 991 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04918 Vifa-Chr3 1428833093 1428836336 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04918 3 1428833093 1428836336 Vifa3g04918 3 1428833093 1428836336 ECH
Vifa3g04918 3 1428833093 1428836336 Vifa2g03599 2 1045537926 1045542040 PCT