Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04900 ATGATGAACGCATCGGTTCTCAATTTCGTGAACACTACGTTAGATTGGGTGGCATATGCTTTAGATGCTCCTTCTACACGAGCAGTGGTTTTTGGATTCAATATTGGTGGTCATTTATTTATCGAAGTTTTTCTCTTGGTGGTTATACTTTTCTTGCTTTCCCAGAAAAGTTACAAGCCTCCTAAAAGGCCTTTGACAAACAAGGAAATTGATGAACTTTGTGATGAATGGGTTCCACAACCCCTTATTCCTTCTCTTAATGAAGAGTTGCACTATGAACCACCAGTGCTGGAGAGTGCTGCAGGGCCACATACCATAGTTAATGGTAAAGACGTTGTAAATTTTGCCTCAGCAAACTATCTTGGGCTTATAGGTCATCAAAAGTTACTTGACTCGTGTTCGTCTGCTTTAGAGAAATATGGCGTTGGTTCTTGTGGTCCCCGTGGGTTTTATGGAACAATTGATGTCCATCTTGACTGTGAAGCGAGAATAGCGAAATTTTTAGGAACACCTGATTCAATTCTGTACTCTTATGGACTTTCGACCATGTTCAGTGCTATTCCCGCATTCTCTAAAAAAGGAGATATAATTGTGGCAGACGAGGGAGTCCACTGGGGAATACAAAATGGCCTTTATCTTTCTAGAAGCACAGTTGTATATTTTAAGCACAATGACATGGATTCTTTAAGTAAAACTTTAGAGAACATTACTTCCAAATATAAGGGGACAAAAAATTTGAGGCGTTATATTGTCGTTGAAGCTCTCTACCAGAATTCTGGCCAAATAGCACCCTTAGATGAGATCATTAAATTGAAGGAAAAATATCGTTTTCGTATTTTATTGGATGAGAGCAACTCGTTTGGTGTACTTGGAAGTTCTGGAAGAGGTCTCACCGAACACTATGGAATACCAGTTGAGAAATTAGATCTTATAACTGCGGCTATGGGACATGCATTGGCTACAGAAGGAGGATTCTGCACCGGAAGTGCAAGAGTTGTAGATCACCAACGATTGAGTAGCTCTGGCTATGTCTTTTCTGCTTCTTTGCCTCCATATCTTGCAAGCGCTGCAATTACAGCTATTGATGTCCTTGACGAAAATCCCAATCTGTTAACAAAATTGAAGAACAACATTGCTGTGTTATGGAAAGGGTTGTCGAAAATACCAAGCTTCAAAATTGCAAGTCATCCAGAGTCACCAATTGTTTATTTGAGATTAAAGAAGTCAACAGGTTCTTTGAAAGATGACCTACATCTGCTTGAAAATATTGCCGAACGTGTTTTGAAAGAAGATTCTGTATTTGTGGCGGCTTCAAGACGATCAACATTGGACAAGTGTAAATTGCCTGTAGGAATTAGATTGTTTGTTTCTGCAGGGCATGAAGAGTCTGATCTTCACAAAGCATCTGAATCATTGGAAAGAGTTGCGGCATTAGTCCTCGGTGATTGTAATTGA 1455 0.3973 MMNASVLNFVNTTLDWVAYALDAPSTRAVVFGFNIGGHLFIEVFLLVVILFLLSQKSYKPPKRPLTNKEIDELCDEWVPQPLIPSLNEELHYEPPVLESAAGPHTIVNGKDVVNFASANYLGLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLSKTLENITSKYKGTKNLRRYIVVEALYQNSGQIAPLDEIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHYGIPVEKLDLITAAMGHALATEGGFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLDENPNLLTKLKNNIAVLWKGLSKIPSFKIASHPESPIVYLRLKKSTGSLKDDLHLLENIAERVLKEDSVFVAASRRSTLDKCKLPVGIRLFVSAGHEESDLHKASESLERVAALVLGDCN 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04900 484 PANTHER CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE 37 475 - -
Vifa3g04900 484 SUPERFAMILY PLP-dependent transferases 82 475 IPR015424 -
Vifa3g04900 484 Gene3D Aspartate Aminotransferase, domain 1 105 470 IPR015422 GO:0003824
Vifa3g04900 484 FunFam serine palmitoyltransferase 1 isoform X1 126 367 - -
Vifa3g04900 484 Pfam Aminotransferase class I and II 110 472 IPR004839 GO:0009058|GO:0030170
Vifa3g04900 484 Gene3D - 126 367 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04900 Vifa-Chr3 1422083539 1422090444 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04900 2 336 Acyl Lipid Metabolism Gene Families AT4G36480 76.418 0.0 561