LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vifa3g04888	ATGGAATATCTAGGGATTGATTTGAGTTGTGCGCTTGGATCTCTTCGTAACGGAAACATCCCTGACAAAGATTGCTTGCTTCCTCTAATTTCCAAACTCCTCGGTTACGCCATCGTCGCAGCTTCCACCACCGTCAAACTCCCTCAGCATAAAAGTGTGAGAGGTCTTAGCATGTTAGCATTCGAGCTTGAAGTTGTTGGGTATACTATAGCACTGGCTTACTCTCTTCACAAAGGCCTTCCTTTTTCAGCTTATGGAGAATTGTTGTTTCTTTTGATCCAAGCTTTCATATTGGTTGCCATAATCTACTACTATTCTCGACCTATTAGTACAATCACATGGATTCGGCCATTGATATATTGTGCTGTAGCACCCCCAGTCTTAGCTGGTAAAATTAATCCTCTCCTCTTTGAGGCCTTGTATGCATCCCAGCATTTAATATTTTTGTGTGCAAGGGTCCCACAAATATGGCAAAACTTTTCTAATAAAAGTACAGGGGAGCTCAGCTTTTTAACTTCTTTTATGAACTTCGGAGGTTCAATGGTTAGAGTATTCACCACCATCCAAGAAAATGCCCCCAAAAGTGTTCTACTGGGCTATGCAATTGGTGTTGCTACAAATTTTACCATCTTAAGTCAGATAGTGTTGTACCAAAAGCCTCAGGCTACAAAAGAGAAGAAAGTGAGATAA	690	0.4101	MEYLGIDLSCALGSLRNGNIPDKDCLLPLISKLLGYAIVAASTTVKLPQHKSVRGLSMLAFELEVVGYTIALAYSLHKGLPFSAYGELLFLLIQAFILVAIIYYYSRPISTITWIRPLIYCAVAPPVLAGKINPLLFEALYASQHLIFLCARVPQIWQNFSNKSTGELSFLTSFMNFGGSMVRVFTTIQENAPKSVLLGYAIGVATNFTILSQIVLYQKPQATKEKKVR	229

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vifa3g04888	229	Gene3D	-	144	228	-	-
	Vifa3g04888	229	Gene3D	-	29	107	-	-
	Vifa3g04888	229	Pfam	PQ loop repeat	30	83	IPR006603	-
	Vifa3g04888	229	Pfam	PQ loop repeat	145	195	IPR006603	-
	Vifa3g04888	229	PIRSF	Mpdu1	6	229	IPR016817	-
	Vifa3g04888	229	SMART	ctns	150	181	IPR006603	-
	Vifa3g04888	229	SMART	ctns	44	69	IPR006603	-
	Vifa3g04888	229	PANTHER	MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED	6	227	IPR016817	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vifa3g04888	Vifa-Chr3	1418731234	1418737017	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vifa3g04888	1	217	Miscellaneous Gene Families	AT4G07390	75.785	7.31e-124	349

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vifa3g04888	3	1418731234	1418737017	Vifa3g04888	3	1418731234	1418737017	ECH