Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04882 ATGGGTGGTTGGGCTATTGCTGTGCATGGTGGTGCTGGTGTTGACCCTGACCTCCCCCTCCAACGCCAAGAAGAAGCCAAACAACTTCTCACTCGTGTTCTCAATCTCGGCATCTCTGCTCTTCGTTCCAATCTTTCCGCCATCGACGTTGTCGAACTTGTGGTGAGAGAATTGGAAACGGATCCACTATTCAACTCGGGTTGTGGATCTGCCCTAACGGCCAAAGGAACTGTCGAGATGGAGGCTAGCATAATGGATGGTCCAAAACGACGATGCGGTGCCGTTTCGGGATTAACCACCGTTAAAAATCCCATTTCTCTCGCAAGATTGGTTATGGACAAATCTCCTCATTCTTATCTTGCTTTTGATGGTGCTGAGGATTTTGCAAGACAACAGGGTGTGGAGGTTGTTGACAATGAGTACTTTATCACTCCTGACAATATTGGTATGCTTAAGCTGGCAAAGGAAGCAAATACAATTCTGTTTGATTATCGAATTCCATCCAAAGGATGTGGTGCAGGAGTTGAAAGTCCATTGAAAATGAATGGACTTCCAATGAGTGTATATGCACCCGAGACAGTCGGATGCGTAGTTGTTGACCGTGAAGGAAGGTGTGCTGCCGCCACTTCCACCGGCGGGCTAATGAACAAAATGGTTGGACGAATCGGCGACTCGCCTCTCATTGGAGCAGGTACATATGCATGTAAACTTGCTGGAGTATCATGCACTGGGGAAGGCGAGGCAATCATCCGGGGGACATTGGCGCGTGATGTGTCCGCTGTTATGGAGTACAAAGGTCTTGGACTTCAAGAGGCAGTGGATTATGTGATTAAGAATCGGTTGGATGAAGGAATGGCTGGACTAATTGCGGTTTCTAGTAAAGGTGAGGTTGCTTATGGATTTAACTGCAATGGTATGTTTAGAGGATGTGCTTCTGAGAATGGGTTTATGGAAGTTGGAATTTGGGAGTGA 972 0.4722 MGGWAIAVHGGAGVDPDLPLQRQEEAKQLLTRVLNLGISALRSNLSAIDVVELVVRELETDPLFNSGCGSALTAKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFDGAEDFARQQGVEVVDNEYFITPDNIGMLKLAKEANTILFDYRIPSKGCGAGVESPLKMNGLPMSVYAPETVGCVVVDREGRCAAATSTGGLMNKMVGRIGDSPLIGAGTYACKLAGVSCTGEGEAIIRGTLARDVSAVMEYKGLGLQEAVDYVIKNRLDEGMAGLIAVSSKGEVAYGFNCNGMFRGCASENGFMEVGIWE 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04882 323 Gene3D (Glycosyl)asparaginase 193 323 - -
Vifa3g04882 323 FunFam Isoaspartyl peptidase/L-asparaginase 193 323 - -
Vifa3g04882 323 Pfam Asparaginase 4 322 IPR000246 GO:0016787
Vifa3g04882 323 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 320 IPR029055 -
Vifa3g04882 323 PANTHER L-ASPARAGINASE 4 309 IPR000246 GO:0016787
Vifa3g04882 323 CDD Asparaginase_2 5 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g04882 Vifa-Chr3 1416585777 1416587369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g04882 6 283 Miscellaneous Gene Families AT4G00590 25.083 1.48e-13 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04882 3 1416585777 1416587369 Vifa3g04882 3 1416585777 1416587369 ECH
Vifa3g04882 3 1416585777 1416587369 Vifa2g03642 2 1061987279 1061988614 PCT