Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g04829 ATGGCGAACAATCTCAATGTTACATGTTCAATTTCATTCACCGATTTCCCCGAAGATGTTCAGCTTTGCATCCTGTCGTTTCTCGGCCCCACCGAGATCGCTTCGTTTGCATGCACCTCGAAGCAATTCGGTTCACTCTGTTCAAACGATGGTAAACTGTGGTTCACGCTTTGCGATCGAAGGTGGGGTTCGAAAACCGAAATCGTGAAATGGGGTGAAGGTAAAATTCCGTATAAACTTCTTTACAATACTCTTCATGAATGGGAGAATCTCATTGGTTTCTGGCGGAGAAGCGGTCCGGGGAGTGCATTGATTTCGTCGCCCTCGTTGGTTTTCTTCGAGTGGGGGCCGTCGTTCATTTTGGCTTTTAGGGTTTCTCCTGTTGAATCGGGATCTGAGATTTTTGCTTATCAGGTTAAAAAGGTGCCTTTTTTGAAGATGGGTATTTCTCAAGAGGGACAAATTCTGAATCTTTTGGATCCTGATGGTAGAGCTGATTTGAATTTGAATTCTGGGGATGGGAATGAATTGATTCCTGTGAATGTTTGTTTTATGGGGAAGACTCATTTTGTTTTGGAGGAGAATGTGTTTGGGAGTAATTCGAGTCCGGTGCATTTTAGTGGTGAGGATTGTGGTTTCTTTGGAGAGGATGGGATTGGAATTGGGGTTGGGAGTGGATCTCCGCCGGATCTGATTATGTTGGAGATTTATCAGCATTTGGCGAACAGGACTAGTCCTGGAAGCGACAGATCAAGGAGGCATAGGAGGAAGGAGAAGGGAAGGATGGCTAGAAGAAAATGGGAGCCTGAGCATTTTGTCAAGATTGTGAATTGCTCGCCGACGGCGTTGCGGCCTTTGCAAGGCCTTTGGAAGGGGATTTGTGCAGACATGAGTTTAGCATTTTACCTTGTGGCTTATGATGACATTGGTGGCATTGCCTGCCGTCGGCTTGGAGATCCTCCTCAACGTTTCTCAACCTATGCCCCGGTTTTTTGGACGTCCAATGCTACATTTATGGAATCTCCCTTTCCTCTAGAGGAAGAATCTCTGTATGGCAGCCGCATTCATCTACAACCTGCTCAACCACACAATGAAAATCATGAGCAGTTCCCTATGTCGGACATTGAAGGGGAAAATCACATTCAGCAGTTCCATTTGTCTGACAATGAAGTGGTGAACCGAATTCTTCTCATAAACGCAAGTTATGATTTAGTTATTCCTGACCTTGCTGCTGGAACAATAAATCCAAGGAGTGCTGAGGGAAGGATTTGGCAGTACCAGGATGGTACTTTTGGATTTGGGTTTGTTCGAGACAACTTTGTCATAGACATGAAAAATATTGTCTGTGATGGTTGTATCATTGATGCAGTAAGCCCTTCTTCTGATTAA 1389 0.4478 MANNLNVTCSISFTDFPEDVQLCILSFLGPTEIASFACTSKQFGSLCSNDGKLWFTLCDRRWGSKTEIVKWGEGKIPYKLLYNTLHEWENLIGFWRRSGPGSALISSPSLVFFEWGPSFILAFRVSPVESGSEIFAYQVKKVPFLKMGISQEGQILNLLDPDGRADLNLNSGDGNELIPVNVCFMGKTHFVLEENVFGSNSSPVHFSGEDCGFFGEDGIGIGVGSGSPPDLIMLEIYQHLANRTSPGSDRSRRHRRKEKGRMARRKWEPEHFVKIVNCSPTALRPLQGLWKGICADMSLAFYLVAYDDIGGIACRRLGDPPQRFSTYAPVFWTSNATFMESPFPLEEESLYGSRIHLQPAQPHNENHEQFPMSDIEGENHIQQFHLSDNEVVNRILLINASYDLVIPDLAAGTINPRSAEGRIWQYQDGTFGFGFVRDNFVIDMKNIVCDGCIIDAVSPSSD 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g04829 462 Gene3D - 4 92 - -
Vifa3g04829 462 ProSitePatterns Neurotransmitter-gated ion-channels signature. 9 23 IPR018000 -
Vifa3g04829 462 PANTHER F-BOX ONLY PROTEIN 48-RELATED 13 291 IPR045118 GO:0019005|GO:0031146
Vifa3g04829 462 Pfam F-box domain 14 50 IPR001810 GO:0005515
Vifa3g04829 462 ProSiteProfiles F-box domain profile. 10 57 IPR001810 GO:0005515
Vifa3g04829 462 SMART fbox_2 16 57 IPR001810 GO:0005515
Vifa3g04829 462 MobiDBLite consensus disorder prediction 243 263 - -
Vifa3g04829 462 SUPERFAMILY F-box domain 10 88 IPR036047 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g04829 3 1397150814 1397152633 Vifa3g04829 3 1397150814 1397152633 ECH