Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03971 ATGGCTCAAGTTTGTGTCCTTGAGACAACGGTGCAACTCAAATCATGTCCTCAAAAGTTCTATAACTTCCTCAAGAGCCAAAGCCAACACATTCCAAATAAAGCACAGAGTGAAAACGTGCATGCTGTTGAGATTCACAAAGGCGATTGGAACACTCCTGGCTCTACTAAGATTTGGAAATTTACCATAGAAGGAAAGGAGGAGATATTCAAGGAAAGAATTGAAGTGGATGAAGTGAACAAAACTATAACTTATGTTGCTGCTGGAGGGAATGTGTTAGAATTGTACAAAAGCTACAAGGCCATTGTGAAAGTTGAGAATCAAATTCTAAAGTTGAGAATAGAATATGAGAAGCTTAATGATGATACCCTACCTCCAAAGAAATACCAGCAGTTTATCATTAATATTGTTAGAGATCTTGATGGAAATTTAGTTAAAACTGGTTAA 447 0.3669 MAQVCVLETTVQLKSCPQKFYNFLKSQSQHIPNKAQSENVHAVEIHKGDWNTPGSTKIWKFTIEGKEEIFKERIEVDEVNKTITYVAAGGNVLELYKSYKAIVKVENQILKLRIEYEKLNDDTLPPKKYQQFIINIVRDLDGNLVKTG 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03971 148 CDD Bet_v1-like 6 141 - -
Vifa3g03971 148 SUPERFAMILY Bet v1-like 5 146 - -
Vifa3g03971 148 SMART Bet_v_1_2 2 147 IPR000916 GO:0006952
Vifa3g03971 148 PANTHER POLYKETIDE CYCLASE/DEHYDRASE AND LIPID TRANSPORT SUPERFAMILY PROTEIN 1 146 - -
Vifa3g03971 148 Coils Coil 102 122 - -
Vifa3g03971 148 Gene3D - 1 146 IPR023393 -
Vifa3g03971 148 Pfam Pathogenesis-related protein Bet v 1 family 6 146 IPR000916 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03971 Vifa-Chr3 1170779976 1170780515 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03971 3 1170779976 1170780515 Vifa3g03971 3 1170779976 1170780515 ECH