Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03645 ATGGCTAGCCACGCCTCATCTTTTTCGAGCCTCCGAACCTATCTCCGAGCCGTATCTCAAACTCCCTCTCGCTTCGCTCGGCGCGGCTTCTCCGTGTCAACCTCATATGAAGAAATGAGCCGCGTCCGAGCCAGGTCCGGTACCAGCATGCGCAAGTCTCTCCGCTGGTTTGACCTAGTCGGCTTCGGTATCGGCGGAATGGTCGGCGCCGGAGTTTTCGTCACCACCGGTAACGCCACGCATAATTTCGCTGGTCCCGCTGTTGTCCTATCTTTCGCCATTGCCGGTTTCTGCGCTCTTTTATCCGCTTTTTGCTATACCGAGTTCGCCGTTGATATGCCGGTCGCCGGTGGAGCTTTCAGCTACCTCCGCGTCACATTCGGTGAATTTGCGGCGTTTTTAACCGGTGCGAATCTCGTCATGGACTACGTTATGTCCAATGCCGCAGTCGCTCGAGGCTTCACGGCGTATGTTGGAACCACAATAGGTGTCTCGCCTGCGAAATGGAGGATCATAATTGCTTCTTTTCCAGAAGGATTTAACCAAATAGACATGGTTGCTGTTGTGGTTGTTTTACTCATCACAATCATTATCTGTTACAGTACGAGGGAGAGTTCAGTGGTGAATATGATATTGACAGCTTTGCATATATTGTTCATAGTATTTGTGATAGTGATAGGTTTTTGGAAAGGGAGCTGGAAGAATTTTACGCAACCGGCTGATCCGGCCGAAAATCCTTCTGGTTTTTTTCCTCACGGTGCGGCCGGTGTGTTTAACGGTGCTGCCGCGGTTTATTTAAGCTACATTGGTTATGATGCGGTTTCAACAATGGCAGAAGAGGTTAAAGAGCCTGTGAAAGATATTCCAATAGGTGTTTCTGGATCTGTGATTATCGTGACGGTTCTTTATTGTCTTATGGCAGCTTCTATGTGCATGCTTCTTCCTTATGATATGATTGATCCTGAGGCACCATTTTCAGCTGCTTTTAAATCAGACGGTTGGGGATGGGTGTCAAGAGTGATAGGAGTGGGGGCCAGTTTTGGAATATTGACATCATTGATAGTGGCTATGTTGGGTCAGGCTCGTTATATGTGTGTAATAGGACGTTCTAATGTGGTCCCTGCCTGGTTTGCTAAGGTCCACCCAAAAACATCTACTCCTGTCAACGCCTCTGCTTTTCTTGGGATATTCACTGCAGCAATTGCACTTTTCACTGATCTTGATGTTCTTCTCAACCTTGTATCAATTGGAACACTCTTTGTTTTCTACATGGTAGCAAATGCTGTTGTTTACCGACGCTACGTGGCTGCAGGGACGACGAATCCATGGCCGACCGTGTCTTTTCTCGTATCATTTTCCTTCACTTCCATTCTGTTCACACTTATTTGGAAAATTGTACCAACAGGAGTAGCAAAAGCAGGGATGTTAGTTGCTTGTGGTGTGTTTGCTGTAGCAATATTACAGTTTTTCCATTTCACAGTTCCTCAAGCTCGAAAACCGGAATTTTGGGGTGTACCGCTTATGCCATGGATACCAGCTATGTCAATATTTTTGAATTTGTTCTTGCTTGGATCACTCGATGGGAAATCGTATATTCGATTCGGAGTGTTTTCGGCTGTTACAGTGCTGTTCTATGTCTTATACAGTGTTCATGCTAGCTTTGATGCAGAAGGTGATGGTGCTATTGATCAAAATGTGGAATCAAAAGAAAGTGTGGACCAAAGTTTCAAAGTGTAG 1737 0.4611 MASHASSFSSLRTYLRAVSQTPSRFARRGFSVSTSYEEMSRVRARSGTSMRKSLRWFDLVGFGIGGMVGAGVFVTTGNATHNFAGPAVVLSFAIAGFCALLSAFCYTEFAVDMPVAGGAFSYLRVTFGEFAAFLTGANLVMDYVMSNAAVARGFTAYVGTTIGVSPAKWRIIIASFPEGFNQIDMVAVVVVLLITIIICYSTRESSVVNMILTALHILFIVFVIVIGFWKGSWKNFTQPADPAENPSGFFPHGAAGVFNGAAAVYLSYIGYDAVSTMAEEVKEPVKDIPIGVSGSVIIVTVLYCLMAASMCMLLPYDMIDPEAPFSAAFKSDGWGWVSRVIGVGASFGILTSLIVAMLGQARYMCVIGRSNVVPAWFAKVHPKTSTPVNASAFLGIFTAAIALFTDLDVLLNLVSIGTLFVFYMVANAVVYRRYVAAGTTNPWPTVSFLVSFSFTSILFTLIWKIVPTGVAKAGMLVACGVFAVAILQFFHFTVPQARKPEFWGVPLMPWIPAMSIFLNLFLLGSLDGKSYIRFGVFSAVTVLFYVLYSVHASFDAEGDGAIDQNVESKESVDQSFKV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03645 578 PIRSF AA_transporter 489 573 - -
Vifa3g03645 578 PIRSF AA_transporter 35 501 - -
Vifa3g03645 578 Pfam C-terminus of AA_permease 503 553 IPR029485 -
Vifa3g03645 578 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 39 553 - -
Vifa3g03645 578 Pfam Amino acid permease 54 478 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vifa3g03645 578 Gene3D Amino acid/polyamine transporter I 49 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03645 Vifa-Chr3 1065586083 1065589795 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03645 141 574 Organic Solute Cotransporters AT3G10600 73.853 0.0 654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03645 3 1065586083 1065589795 Vifa3g03645 3 1065586083 1065589795 ECH