Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03592 ATGAGTGCTGCTTCTCTCATTCCTGTATCTTTGTTACCCTCTCTCGCTTCACCTTTCAAGGGAAATGTGAAAACTTTGTTGGCAAAACCATGTTTATGTCCGTGTTTGAAAATTCAGAGACCAAAACACCGTGTTTCTGTAGTTAACAAGGCTGGTTCTGCTTACGTGAAACCAGTCGGTGAGAATGTTAGGTTTAGGTTGGACAATTTGGGGCCTCAGCCTGGTTCGAGAAAGAAGGCCAAGAGAAAAGGGAGAGGTATAGCTGCGGGACAAGGAGCGAGTTGTGGGTTTGGAATGAGGGGGCAGAAGTCGAGATCCGGACCGGGGATTATGAGGGGTTTTGAAGGGGGTCAAATGCCGCTTTATAGAAGACTACCTAAACTTAGAGGAATTGCTGGAGGTATGAGCGCGGGATTGCCAAAATATGTCAATGTAAATCTTACGGACATTGAAAACGCTGGATTTCAAGATGGGGAGGAGGTGTCTTTGGAGACACTGAAGGAGAAACGCGTGATCAACCCTTCAGGAAGAGATCGGAAACTTCCTTTGAAGATTTTGGCTGATGGAGAACTAAGCAAGAAGTTAACGATAAAAGCCTGCGCTTTTTCCACGTCTGCAAAGGAGAAACTCGAGTCTGCTGGCTGTTCCCTCATTGTTCTTCCCGGCCGTAAGAAATGGGTTAAGCCATCAGTTGCCAAAAACCTTGCACGTGCCGATGAATACTTTGCCAAGAAGCGCGGTGAAACTGCTTCTGAACCAGCCCCTGTTTGA 771 0.4682 MSAASLIPVSLLPSLASPFKGNVKTLLAKPCLCPCLKIQRPKHRVSVVNKAGSAYVKPVGENVRFRLDNLGPQPGSRKKAKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMSAGLPKYVNVNLTDIENAGFQDGEEVSLETLKEKRVINPSGRDRKLPLKILADGELSKKLTIKACAFSTSAKEKLESAGCSLIVLPGRKKWVKPSVAKNLARADEYFAKKRGETASEPAPV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03592 256 PANTHER 50S RIBOSOMAL PROTEIN L15 51 246 IPR005749 GO:0003735|GO:0006412|GO:0015934
Vifa3g03592 256 NCBIfam 50S ribosomal protein L15 67 217 IPR005749 GO:0003735|GO:0006412|GO:0015934
Vifa3g03592 256 Pfam Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 91 216 IPR021131 -
Vifa3g03592 256 SUPERFAMILY Ribosomal proteins L15p and L18e 68 219 IPR036227 -
Vifa3g03592 256 Hamap 50S ribosomal protein L15 [rplO]. 67 220 IPR030878 GO:0003735|GO:0006412|GO:0015934
Vifa3g03592 256 Gene3D - 142 218 - -
Vifa3g03592 256 ProSitePatterns Ribosomal protein L15 signature. 184 214 IPR001196 GO:0003735|GO:0005840|GO:0006412
Vifa3g03592 256 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03592 Vifa-Chr3 1037337808 1037341721 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03592 3 1037337808 1037341721 Vifa3g03592 3 1037337808 1037341721 ECH