Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03587 ATGGACCTCTCTCTGAACACAACAACACTCCGATTTGATTCACAAAACCACTTCACTTTACCCCTACACCATAATCCAATATCCATTTCAATCAAACTCAAGGAAAAGTCAACACTGAGATTGAACGCAAAGAAAAAGTCAACGATTGAAGGTATTAGTGACGAGTTGAATTCCATAGCTTCTCTTAATCTTGATTTTGCACCTTCTCGTAGACATGTTCGACAAGCCTTCACTCATGTGCAACACCAACTAGACCATTTCTTATTCAAGACTGCACCTGCTGGAATCAGAACTCAAGAATGGTATGAAAAAAATTCAAGGGGATTGGAGATTTTCTGCAAAAGTTGGATGCCGGAACACGGGGTTCCAAACAAGGGAGCTTTGTTTTTCTGTCATGGATATGGCAGTACTTGCACTTTCTTCTTTGAAGGTATTGCGAGGCGAATTGCTGCTTCTGGATATTGTGTTTATGCAATGGACTTTGAGGGTTTCGGTTTATCAGATGGATTACATGGTTATGTACCGAGTTTCGATGATTTGGTTGATGATGTTATAGAATACTCTACAAAAATTAAAGCAAGACCTGAGGTGAGAGATTTGCCGCGATTTATATTCGGGCAGTCCATGGGTGGAGCAATTGCTCTTAAAGCCCATTTGAAGAAACCTAATGATTGGGATGGAGTCATTCTTGTAGCACCAATGTGTAAAATTTCAGAAGGCATGATACCATCAACTACAATTTTGAATGTGTTAACTCTTTTGTCTAAAATGATGCCAAAGGCAAAACTATTTCCTTACAAGGATCTAACCGAGCTGATTATCCGAGAACCCGGCAAAAGAAAATTTGCAGGTTACAATGTTGTTTCTTACGACGATAAAACGCGATTAAGAACTGGAATGGAACTCTTGAGTGCTACTCAAGATATTGAGTCACAGTTAGAGAAGGTTTCAGCTCCATTGTTGATTCTTCATGGAGCAGAAGATAAGGTGACAGATCCATTGGTGAGCCAATTTCTTTATGAGAAAGCTTGTAGCAGAGATAAGACACTAAAGATATATGAAGGAGGTTACCATGGTATTTTGGAAGGTGAACCTGATGAAAGAATTTCATCCGTTCATAATGATATTATCTCATGGCTTGACTTTAGGTGTTCTAGATGA 1161 0.391 MDLSLNTTTLRFDSQNHFTLPLHHNPISISIKLKEKSTLRLNAKKKSTIEGISDELNSIASLNLDFAPSRRHVRQAFTHVQHQLDHFLFKTAPAGIRTQEWYEKNSRGLEIFCKSWMPEHGVPNKGALFFCHGYGSTCTFFFEGIARRIAASGYCVYAMDFEGFGLSDGLHGYVPSFDDLVDDVIEYSTKIKARPEVRDLPRFIFGQSMGGAIALKAHLKKPNDWDGVILVAPMCKISEGMIPSTTILNVLTLLSKMMPKAKLFPYKDLTELIIREPGKRKFAGYNVVSYDDKTRLRTGMELLSATQDIESQLEKVSAPLLILHGAEDKVTDPLVSQFLYEKACSRDKTLKIYEGGYHGILEGEPDERISSVHNDIISWLDFRCSR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03587 386 Pfam Serine aminopeptidase, S33 124 365 IPR022742 -
Vifa3g03587 386 PANTHER PHOSPHOLIPASE-RELATED 97 381 - -
Vifa3g03587 386 PRINTS Alpha/beta hydrolase fold signature 153 168 IPR000073 -
Vifa3g03587 386 PRINTS Alpha/beta hydrolase fold signature 320 334 IPR000073 -
Vifa3g03587 386 PRINTS Alpha/beta hydrolase fold signature 204 217 IPR000073 -
Vifa3g03587 386 Gene3D alpha/beta hydrolase 94 384 IPR029058 -
Vifa3g03587 386 FunFam Alpha/beta-Hydrolases superfamily protein 94 386 - -
Vifa3g03587 386 SUPERFAMILY alpha/beta-Hydrolases 80 381 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03587 Vifa-Chr3 1033463679 1033465751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03587 1 383 Acyl Lipid Metabolism Gene Families AT1G77420 59.269 1.02e-163 462
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03587 3 1033463679 1033465751 Vifa3g03587 3 1033463679 1033465751 ECH