Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03567 ATGGAGTGTAACAAAATTGAGTTAGCTCGTTTGACCGATGCCGCCGCTGATGCTGTCAAACAATTGCTGCCTGCTTATGCGAATGATGATTTGTCAAGTGTTTGTACATGGGCTGATCGCGTCAAGTTTGCTCTTCGTTGGACGTCTGCTTTGCACTACGCCGATACTCCTCCTAAGCTTTGCAATTTCCAATATGCTAGGGATTGCAAGGATTTGAATGGTGTGAAAGATGTATGTGTTGTTGGAGCAATTAACAATTACACTACTCAACTTCTTGACTATGGCAAAAAAGACACTCAATACAATCTTACACAAGCACTTCTTTTCCTTTCTCATTTTATGGGAGATGTCCATCAGCCTCTACATACTGGTTTTACCACAGACAAGGGAGGAAATACAATCGATGTTCATTGGTACACAAGGAAACAAAATCTTCACCATGTTTGGGATGCTAACATTATTGAAACAGCACAAGAAAGATTCTATGACAATAACATTGATGAATACTTTAAGGACATTCAAAAAAACATCACGAAAACATGGTCAAATGAAGTAGCAGATTGGGAAGCTTGCAGTTCTGATCTGGCTACATGTCCAAATGTTTATGCATCTGAAGGTGTTAAGGATGCTTGTCAATACGCATATAAAGATGCTCCTGAAGATTCTACTCTAGAAGATGATTACTTCCTATCGCGTTTGCCGATCGTCAGTTTGCGATTAGCTCAAGGAGGAGTTCGATTGGCCGCAACTCTCAATCGTATTTTTCAGTGA 771 0.4021 MECNKIELARLTDAAADAVKQLLPAYANDDLSSVCTWADRVKFALRWTSALHYADTPPKLCNFQYARDCKDLNGVKDVCVVGAINNYTTQLLDYGKKDTQYNLTQALLFLSHFMGDVHQPLHTGFTTDKGGNTIDVHWYTRKQNLHHVWDANIIETAQERFYDNNIDEYFKDIQKNITKTWSNEVADWEACSSDLATCPNVYASEGVKDACQYAYKDAPEDSTLEDDYFLSRLPIVSLRLAQGGVRLAATLNRIFQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03567 256 PANTHER ENDONUCLEASE 4 5 255 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vifa3g03567 256 Gene3D P1 Nuclease 2 256 IPR008947 GO:0016788
Vifa3g03567 256 Pfam S1/P1 Nuclease 9 256 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vifa3g03567 256 FunFam Endonuclease 2 1 256 - -
Vifa3g03567 256 CDD S1-P1_nuclease 10 255 IPR003154 GO:0003676|GO:0004519|GO:0006308
Vifa3g03567 256 SUPERFAMILY Phospholipase C/P1 nuclease 6 254 IPR008947 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03567 Vifa-Chr3 1026559810 1026561591 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03567 3 1026559810 1026561591 Vifa3g03567 3 1026559810 1026561591 ECH