Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03499 ATGGGAATCATCCAATACGATCCAATCTATTCTCTGTGCAAAATCTCTTCCCCCTTCCGTCGTTTCCCACGCGCCACCGCTCCCTTCCGTATTAGAGCGTTCTCCACCGCCGTCCACGATAAGCCTTCCATTTGCACCGCCGACGAACTTCACTATGTCTCCGTTTCCAATTCCGAATGGAAGCTTGCCTTATGGCGCTACCATCCGTGTCCTCAGGCACCTCCCAGAAATCATCCTCTACTGCTGTTGTCTGGAGTGGGGACTAATGCTGTTGGATATGACCTTTCGCCTCAGTCATCCTTTGCACGTCACATGTCTGGTCAGGGATTTGAGACTTGGATTCTTGAAGTACGAGGAGCTGGGTTGAGTGTTCAGGGTTTAAATTCCCAAGACATTGAACAGGCTGCCCATTCAATGTCTGAGAAAATGGAAGATGTGTTGGAAAATACAACCAATGGATCCGTGTCTTCAAAAAAAGATTTAGATAACATATCTGGTGCTGTATCTGAACCTTACAATTCTTCCTCAGAAGTAGTAGAAACAGAGAATGTGGCTGTCATAGGAGACCTAGCTAGGTTAGCTACTGCCTGGGATGAATCAAAGTTGGTCGCCAAGTTGTCTGAGACTTTTACACTTTTGTCAGAAAGAGTCTCTGGGTTTCTTGGTGAAAGTCAGGCGAAGATCATGTCTGCCAGATTACTTGATCAAATTTCAAAACTTTTGGTGGACTCTCAATTATATGAACAATTCAATGAGGTAAGAGGAAAGCTTGCAACTTTGTTGGAAACAAGACAAACTTCTGGCATTAGTAATCAAATAACTGATCTAAGTGAAAAGCTAGTAGATATTATTGAGGCAGGTCAGCTATCCGTTTCGCCTCCATTATTTGATTTGCAAGCTCGCTTTACTTCTACAATTGAAGATTTTCAGAAGCAACTGGACTTGATGGTCAAGTATAATTGGGACTTTGATCATTACTTGGAAGAAGATGTTCCTGCAGCGATAGAATACATTTTGAAACAAAGCATATCAAAAGATGGAAAATTGCTTGCAATTGGACACTCCATGGGTGGCATCTTACTATATTCAATGCTGTCACGGTTTGGTTCTGAAGGAAAAGAATCTAGATTGGCTGCAGTAGTTACCCTGGCATCATCTCTGGACTACACATCATCCAAGTCAACTTTGAAGTTACTCTTGCCACTCGCAGATCCTGCACAAGCTCTGAGTGTCCCAGTTGTTCCTTTAGGGGCATTGTTGGTAGCAGCTTATGAGGTTTCATCTCGTTCACCATATGCACTGTCATGGTTAAATACTTTGATTTCAGCCGAGGGCATGATGGATCCTGATTTATTTAAAAGGCTGGTCTTGAATAACTTCTGCACCATACCGGCAAAACTTCTCTTACAACTCACAACTGCATTTCGAGAGCGTGGTTTATGTAATAGGAACGGAACATTTTTTTACAAGGACCATCTACACAAAAGCAACGTACCTATTTTAGCTATTGCTGGAGACAAGGATCTGATTTGTCCACCTGAAGCCGTGGAAGATACTGTTAAACTAATTCCGGAGCACCTAGTTACCTATAAAGTTTTTGGAGATCCCGAAGGCCCGCATTATGCTCATTATGATTTGGTTGGAGGAAGACTGGCGGTGGAGCAAGTATATCCCAGTATAATTGAATTTCTTAGTTGTCACGACGAGAAATAA 1713 0.4273 MGIIQYDPIYSLCKISSPFRRFPRATAPFRIRAFSTAVHDKPSICTADELHYVSVSNSEWKLALWRYHPCPQAPPRNHPLLLLSGVGTNAVGYDLSPQSSFARHMSGQGFETWILEVRGAGLSVQGLNSQDIEQAAHSMSEKMEDVLENTTNGSVSSKKDLDNISGAVSEPYNSSSEVVETENVAVIGDLARLATAWDESKLVAKLSETFTLLSERVSGFLGESQAKIMSARLLDQISKLLVDSQLYEQFNEVRGKLATLLETRQTSGISNQITDLSEKLVDIIEAGQLSVSPPLFDLQARFTSTIEDFQKQLDLMVKYNWDFDHYLEEDVPAAIEYILKQSISKDGKLLAIGHSMGGILLYSMLSRFGSEGKESRLAAVVTLASSLDYTSSKSTLKLLLPLADPAQALSVPVVPLGALLVAAYEVSSRSPYALSWLNTLISAEGMMDPDLFKRLVLNNFCTIPAKLLLQLTTAFRERGLCNRNGTFFYKDHLHKSNVPILAIAGDKDLICPPEAVEDTVKLIPEHLVTYKVFGDPEGPHYAHYDLVGGRLAVEQVYPSIIEFLSCHDEK 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03499 570 ProSitePatterns Prolyl endopeptidase family serine active site. 330 360 IPR002471 GO:0004252|GO:0006508
Vifa3g03499 570 Pfam alpha/beta hydrolase fold 324 535 IPR000073 -
Vifa3g03499 570 FunFam Alpha/beta hydrolase family protein 314 566 - -
Vifa3g03499 570 MobiDBLite consensus disorder prediction 150 172 - -
Vifa3g03499 570 FunFam Alpha/beta hydrolase family protein 49 143 - -
Vifa3g03499 570 SUPERFAMILY alpha/beta-Hydrolases 319 565 IPR029058 -
Vifa3g03499 570 Gene3D alpha/beta hydrolase 48 152 IPR029058 -
Vifa3g03499 570 Gene3D alpha/beta hydrolase 309 566 IPR029058 -
Vifa3g03499 570 SUPERFAMILY alpha/beta-Hydrolases 52 139 IPR029058 -
Vifa3g03499 570 PIRSF UCP031088_abhydr 10 570 IPR016969 -
Vifa3g03499 570 PANTHER LYSOSOMAL ACID LIPASE-RELATED 51 566 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03499 Vifa-Chr3 1008665778 1008674570 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03499 3 1008665778 1008674570 Vifa3g03499 3 1008665778 1008674570 ECH