Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03490 ATGGCGTTAGGGAGTTTCTTGTCTTTTCCTAGATTTTGGACATTCTTTCAGGGAGGGAGACAGATTGATCCTACTGCACATACAATAAAGTCTCATGGAGCCACACTTGCTAGAAATCATATTCATGATTGGCTTATATTGGTGCTTCTTATATTAATTGAGGTTATTCTCAATGTAATTCATCCGTTTCGCCGCTTCGTTGGAAGGGATATGATGGAAGATCTTATGTATCCAATGAAAGAAAACACTGTCCCTGTATGGGCTGTTCCTCTTTATGCGGTTCTGTTGCCAATATCTGTGTTCCTGTTCGTCTATATGCGTAGGAGAGATGTTTATGATTTGCACCACAGTGTTCTTGGCCTTCTGTTTGCTGTTCTGATAACTGGTGTGTTGACTGATTCAATTAAAGATGCTGTTGGCCGGCCACGGCCGGACTTCTTTTGGCGTTGCTTTCCTGATGGAATACAGGTGTATGATAACTTGGGAGGTGTGATTTGCCATGGCAAGGCTAGTGATATAAAAGAAGGACATAAGAGTTTCCCTAGCGGCCATACATCATGGTCCTTTGCAGGTCTTGGTTTTCTCTCCTTGTATCTATCCGGGAAGGTTAAAGTTTTTGATCGTAAAGGGCACGTGGCAAAGTTATGCATTGTGTTTTTTCCTCTACTTGCTGCCTGTCTGGTTGGAATCTCTAGAGTGGATGACTATTGGCACCACTGGCAAGATGTATTTGCCGGAGGCCTTCTAGGCCTTTTTATCGCAACATTTTGCTATTCGCAGTTCTTTCCGCCCCCCTATAATGATGATGGATGGGGTCCATATGCATATTTTGTTGCTATGGAGGAATCAAGAGGCAATGCAAATTTGAATCGAGAATCGCCCGCTATACAAGCCATGGATGACAGGACAGTCGCAACTCGAGTACCAAGGATAAATGGCGATGCAGTCACGCCTTTCAGTTATCTCAGCCCAACCTTGGAAGCCATGGAAATGGGAGGGACACAATTGAAATCATGA 1017 0.4385 MALGSFLSFPRFWTFFQGGRQIDPTAHTIKSHGATLARNHIHDWLILVLLILIEVILNVIHPFRRFVGRDMMEDLMYPMKENTVPVWAVPLYAVLLPISVFLFVYMRRRDVYDLHHSVLGLLFAVLITGVLTDSIKDAVGRPRPDFFWRCFPDGIQVYDNLGGVICHGKASDIKEGHKSFPSGHTSWSFAGLGFLSLYLSGKVKVFDRKGHVAKLCIVFFPLLAACLVGISRVDDYWHHWQDVFAGGLLGLFIATFCYSQFFPPPYNDDGWGPYAYFVAMEESRGNANLNRESPAIQAMDDRTVATRVPRINGDAVTPFSYLSPTLEAMEMGGTQLKS 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03490 338 SMART acid_phosph_2 118 258 IPR000326 -
Vifa3g03490 338 FunFam Lipid phosphate phosphatase 2 38 269 - -
Vifa3g03490 338 PANTHER LIPID PHOSPHATE PHOSPHATASE 29 287 IPR043216 GO:0006644
Vifa3g03490 338 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 40 265 IPR036938 -
Vifa3g03490 338 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 39 269 - -
Vifa3g03490 338 CDD PAP2_containing_1_like 75 261 - -
Vifa3g03490 338 Pfam PAP2 superfamily 118 262 IPR000326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03490 Vifa-Chr3 1005476097 1005478625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03490 1 318 Lipid Metabolism Gene Families AT2G01180 63.190 1.82e-154 434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03490 3 1005476097 1005478625 Vifa3g03490 3 1005476097 1005478625 ECH