Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03489 ATGGCGTTAGGGAGTTTCTTGTCTTTTCCTAGATTTTGGACATTCTTTCAGGGAGGGAGACAGATTGATCCTACTGCACATACAATAAAGTCTCATGGAGCCACACTTGCTAGAAATCATATTCATGATTGGCTTATATTGGTGCTTCTTATATTAATTGAGGTTATTCTCAATGTAATTCATCCGTTTCGCCGCTTCGTTGGAAGGGATATGATGGAAGATCTTATGTATCCAATGAAAGAAAACACTGTCCCTGTATGGGCTGTTCCTCTTTATGCGGTTCTGTTGCCAATATCTGTGTTCCTGTTCGTCTATATGCGTAGGAGAGATGTTTATGATTTGCACCACAGTGTTCTTGGCCTTCTGTTTGCTGTTCTGATAACTGGTGTGTTGACTGATTCAATTAAAGATGCTGTTGGCCGGCCACGGCCGGACTTCTTTTGGCGTTGCTTTCCTGATGGAATACAGGTGTATGATAACTTGGGAGGTGTGATTTGCCATGGCAAGGCTAGTGATATAAAAGAAGGACATAAGAGTTTCCCTAGCGGCCATACATCATGTCTTGGTTTTCTCTCCTTGTATCTATCCGGGAAGGTTAAAGTTTTTGATCGTAAAGGGCACGTGGCAAAGTTATGCATTGTGTTTTTTCCTCTACTTGCTGCCTGTCTGGTTGGAATCTCTAGAGTGGATGACTATTGGCACCACTGGCAAGATGTATTTGCCGGAGGCCTTCTAGGCCTTTTTATCGCAACATTTTGCTATTCGCAGTTCTTTCCGCCCCCCTATAATGATGATGGATGGGGTCCATATGCATATTTTGTTGCTATGGAGGAATCAAGAGGCAATGCAAATTTGAATCGAGAATCGCCCGCTATACAAGCCATGGATGACAGGACAGTCGCAACTCGAGTACCAAGGATAAATGGCGATGCAGTCACGCCTTTCAGTTATCTCAGCCCAACCTTGGAAGCCATGGAAATGGGAGGGACACAATTGAAATCATGA 1005 0.4368 MALGSFLSFPRFWTFFQGGRQIDPTAHTIKSHGATLARNHIHDWLILVLLILIEVILNVIHPFRRFVGRDMMEDLMYPMKENTVPVWAVPLYAVLLPISVFLFVYMRRRDVYDLHHSVLGLLFAVLITGVLTDSIKDAVGRPRPDFFWRCFPDGIQVYDNLGGVICHGKASDIKEGHKSFPSGHTSCLGFLSLYLSGKVKVFDRKGHVAKLCIVFFPLLAACLVGISRVDDYWHHWQDVFAGGLLGLFIATFCYSQFFPPPYNDDGWGPYAYFVAMEESRGNANLNRESPAIQAMDDRTVATRVPRINGDAVTPFSYLSPTLEAMEMGGTQLKS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03489 334 FunFam Lipid phosphate phosphatase 2 38 265 - -
Vifa3g03489 334 PANTHER LIPID PHOSPHATE PHOSPHATASE 29 283 IPR043216 GO:0006644
Vifa3g03489 334 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 39 265 - -
Vifa3g03489 334 CDD PAP2_containing_1_like 75 257 - -
Vifa3g03489 334 SMART acid_phosph_2 118 254 IPR000326 -
Vifa3g03489 334 Pfam PAP2 superfamily 118 258 IPR000326 -
Vifa3g03489 334 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 40 261 IPR036938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03489 Vifa-Chr3 1005476097 1005478625 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03489 1 314 Lipid Metabolism Gene Families AT2G01180 61.656 1.45e-147 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03489 3 1005476097 1005478625 Vifa3g03489 3 1005476097 1005478625 ECH