Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03482 ATGGAGAAAGTTTGTGAATTCTGCACAGCATTGAGGCCACTTGTTTACTGTAATGCTGATGCAGCATATCTTTGTCTATCCTGTGATGCAAAAGTCCATTGGGCGAATGAACTGTCCGGCCGGCACCCCCGTACCCTTGTGTGTAACTCGTGCAAATCTCATCTTGCTTATGTTCAGTGCTTGGATCACAAAATGTTAGTCTGTCGAGACTGTGATCGAAATCTGCACGATGGTTCTTCAACGCATCGCAGACGAGCTGTCAAAACATTCGTCGGCTGCCCTTCTGCCAAGGAGTTTGCAACACTATGGGGATTTGAGTTTAAGGAGATTGAAAAGTGTGTCAATCAGAAGGATCTGTTCGCATCTGGTTCTCGTGTTTCAACGTTCGATAAGGGGTCTAGCAGTCGACTAGGTCAGATAATGTTCAATGATCACGAGCGGAAAACTATTCTGCAGCAGATCGTTGATTTAAAACGGTTTCAGCTAAGTGAGGAGAATGATCATTCTACAAAGATAAATGGGCTACATGTGGATGAAAAATTCAATCAGCAAGCTCAAAAATCTCAGGATTTTGCTATTAGTCTTCTGGAGGAAGACAATCCGATCGGAGAGGTGAATACCGAAACCTTCTCGTCTGCGTTTTCTCAACTTGATAATTTGTCTTCATCTTCAGCTATGGACCTTCCCTTGAATGGAGAATTGTTTTGGACTTACAAAAGTTCACTTCAAAATAATCAGTTATGGTCCCAAAATATTCAAGACCTGGGAATATGCGAAGAACTTGCTTGTCAAGATGATTTTAACATGCCCGACGTTGACTTAACATTCCAAAACTATGAAGAACTATTTGAAGGAGATCAAGATCCAATTAGAGTCATGTTTGGTGGCAAAGATCTCTCCTGTTCTTCTTTAGAGAAAGATTTATCCGTCGATGACTAA 939 0.4164 MEKVCEFCTALRPLVYCNADAAYLCLSCDAKVHWANELSGRHPRTLVCNSCKSHLAYVQCLDHKMLVCRDCDRNLHDGSSTHRRRAVKTFVGCPSAKEFATLWGFEFKEIEKCVNQKDLFASGSRVSTFDKGSSSRLGQIMFNDHERKTILQQIVDLKRFQLSEENDHSTKINGLHVDEKFNQQAQKSQDFAISLLEEDNPIGEVNTETFSSAFSQLDNLSSSSAMDLPLNGELFWTYKSSLQNNQLWSQNIQDLGICEELACQDDFNMPDVDLTFQNYEELFEGDQDPIRVMFGGKDLSCSSLEKDLSVDD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03482 312 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 285 - -
Vifa3g03482 312 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
Vifa3g03482 312 CDD Bbox1_BBX-like 4 47 - -
Vifa3g03482 312 SMART bboxneu5 48 87 IPR000315 GO:0008270
Vifa3g03482 312 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03482 Vifa-Chr3 1003781021 1003782140 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03482 1 290 C2C2-CO-like Transcription Factor Family AT1G68190 42.321 2.40e-67 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03482 3 1003781021 1003782140 Vifa3g03482 3 1003781021 1003782140 ECH