Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03469 ATGGCTTCTGCAAAACTCAACTCTCTCTCTTCCCAATGGATCGCCAATAATCCATTCTCTTCTCGCCGTGGATCTTCTGTTTCCTCCACTCGTAATCTCTCTCTTCCGATCCGCGCTTCTTCTTACTCCGATGAACTCGTTCTAACCGCCAAAACGGTTGCGTCTCGTGGTCGTGGAATTCTTGCGATTGATGAGTCTAATGCAACTGCTGGGAAGCGTTTGGCGTCTATTGGATTGGATAATACTGAGGCTAATCGTCAGGCTTATAGGCAACTTCTGTTGACAACACCGGGTCTCGGCGAATATGTTTCCGGCTCGATTCTTTTTGAGGAAACTCTTTATCAGTCAACAACTGATGGGAAGAAGTTTGTTGATGTTCTTCGTGAGGGAAACATTGTTCCTGGCATCAAAGTTGATAAGGGTTTGGTTCCTCTACCAGGGTCAAACAATGAATCTTGGTGCCAAGGGTTAGATGGATTGGCTTCTAGATCTGCTGAATACTACAAGCAAGGTGCTCGATTTGCTAAGTGGAGAACAGTTGTTAGCATCCCATCTGGTCCTTCTGCTTTAGCTATTAAGGAAGCAGCATGGGGACTTGCACGATACGCTGCTATCTCACAGGACAATGGTCTTGTTCCAATAGTTGAACCTGAAATTCTTCTTGATGGGGATCATCCGATTGAGAGAACACTTGAAGTTGCCGAGAAGGTATGGTCGGAAGTCTTCTTCTATCTGGCCCAAAACAATGTCCTTTTTGAGGGAATTTTGCTCAAACCTAGCATGGTTACACCCGGCGCCGAGCACAAGGAAAAGGCTTCTCCAGAAACCATTGCCAAATATACTCTAACCATGCTTAAAAGAAGAGTTCCTCCTGCAGTTCCAGGAATCATGTTTTTGTCAGGTGGACAATCAGAAGTTGAAGCAACACTAAACCTTAATGCAATGAACCAAAGTCCCAACCCATGGCACGTGTCTTTCTCATATGCACGAGCACTGCAGAACAGTGTGCTTAAGACATGGCAAGGTCGCCCTGAGAATGTGGAAGCAGCTCAGAAGTCTCTTTTGGTCCGTGCCAAAGCTAACTCCTTGGCTCAGCTTGGAAGATACTCGGCCGAAGGTGAAAATGAAGAAGCCAAGGCGGGAATGTTCGTCAAGGGCTATACCTACTAG 1170 0.4624 MASAKLNSLSSQWIANNPFSSRRGSSVSSTRNLSLPIRASSYSDELVLTAKTVASRGRGILAIDESNATAGKRLASIGLDNTEANRQAYRQLLLTTPGLGEYVSGSILFEETLYQSTTDGKKFVDVLREGNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAIKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKEKASPETIAKYTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNSVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEAKAGMFVKGYTY 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03469 389 SUPERFAMILY Aldolase 36 389 - -
Vifa3g03469 389 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 40 389 IPR000741 GO:0004332|GO:0006096
Vifa3g03469 389 Pfam Fructose-bisphosphate aldolase class-I 45 389 IPR000741 GO:0004332|GO:0006096
Vifa3g03469 389 NCBIfam fructose-bisphosphate aldolase class I 46 365 - -
Vifa3g03469 389 CDD FBP_aldolase_I_a 43 369 - -
Vifa3g03469 389 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 250 260 IPR029768 -
Vifa3g03469 389 FunFam Fructose-bisphosphate aldolase 28 388 - -
Vifa3g03469 389 Gene3D Aldolase class I 26 388 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03469 Vifa-Chr3 994483090 994484936 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03469 40 389 Miscellaneous Gene Families AT3G52930 55.932 8.28e-136 390
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03469 3 994483090 994484936 Vifa3g03469 3 994483090 994484936 ECH