Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03459 ATGGGTTTGGGAACCACCACTGTTCCTACCAACATCCTTCCCCAATTTGGGTTGCTCCGAACCCACTTAAACCCTATTCGGGTCAACAATTCTTCCGGATTCACCTACCCTCTCTCTCGAAGGAAGAACAAGAGTCTTGATAAACTCGTTTGCTTCGCCGTTGACGATGGAATCAGAGAGAAACAGCAACAAAAGTTGAGTACTAGTTCGAATAGACTTGGCTCCGCCATTGAAGAAAGACCAGAAAATAAAGATATGATTGATGGTATAAGTGAAGATGATGGGGAGAGAAGTGCTATCTATGATTTTCTTTATCCTAGTAAAGAGCTTCTACCTGATGATAAAGAAATGAGCATATTCGATCACCTTGAAGAGCTACGAGAGAGAATCTTTATATCAGTTCTTGGAGTTGGAGGAAGCATTTTGGGATGCTTTGCATTTTCGAAAGATTTGGTAAAGATTCTCGAAGCTCCTGTTAAATCAGAGGGTGTCAGATTTCTTCAACTAGCTCCTGGTGAATTTTTCTTCACCACTTTAAAGGTGTCTGGATATTGTGGCCTCCTCTTGGGAAGTCCCATCATTCTCTACGAAATCATAGCCTTTATCATTCCAGGTCTAACGAAAGAAGAAAGAAAGTTTCTAGGACCAATTGTTTTAGGCTCATCAGTTCTTTTCTACGCCGGAATAACCTTCTCCTACTTAGTTCTGGTACCTGCGGCATTAAATTTCTTTGTCAATTACGCTGAAGGTGCTGTTGAATCGTTGTGGTCCATCGATCAATACTTTGAGTTTGTTCTGGTTCTTATGTTCAGCACAGGCTTGTCTTTTCAGGTGCCGATTATACAAATTCTATTGGGACAACTTGGATTGGTATCTGGAGACAAGATGCTATCGATTTGGAGGTATGTTGTAGTCGGTGCAGTAGTCGCAGCTGCTATAGTTACGCCGTCTACAGATCCTCTCACTCAACTTCTTCTAGCGGCACCCTTATTAGGCCTTTATCTGGGTGGTGCTTGGATGGTCAAACTCGCTGGACGGTAA 1041 0.4246 MGLGTTTVPTNILPQFGLLRTHLNPIRVNNSSGFTYPLSRRKNKSLDKLVCFAVDDGIREKQQQKLSTSSNRLGSAIEERPENKDMIDGISEDDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPIIQILLGQLGLVSGDKMLSIWRYVVVGAVVAAAIVTPSTDPLTQLLLAAPLLGLYLGGAWMVKLAGR 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03459 346 MobiDBLite consensus disorder prediction 77 92 - -
Vifa3g03459 346 Hamap Sec-independent protein translocase protein TatC [tatC]. 114 346 IPR002033 GO:0016020
Vifa3g03459 346 NCBIfam twin-arginine translocase subunit TatC 119 334 IPR002033 GO:0016020
Vifa3g03459 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 210 236 IPR002033 GO:0016020
Vifa3g03459 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 261 289 IPR002033 GO:0016020
Vifa3g03459 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 192 210 IPR002033 GO:0016020
Vifa3g03459 346 PRINTS Bacterial Sec-independent translocation TatC protein family signature 118 145 IPR002033 GO:0016020
Vifa3g03459 346 Pfam Sec-independent protein translocase protein (TatC) 121 329 IPR002033 GO:0016020
Vifa3g03459 346 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC 98 346 IPR002033 GO:0016020
Vifa3g03459 346 MobiDBLite consensus disorder prediction 63 92 - -
Vifa3g03459 346 ProSitePatterns TatC family signature. 261 280 IPR019820 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03459 3 990065412 990067279 Vifa3g03459 3 990065412 990067279 ECH