Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03457 ATGGAAAAGGGTTTGTTAGAGAGAGATAGTAGAGAAGGTGAATCAGGAAGAACCATAACATGGGGTTTGTTTGTTCAAGAGGTGAAAGACGTTGGTTTTCTAGCTTTGCCTATGATTACTGTCACTTTGTCACAGTATTTTCTGCAAATTATTTCGATGATCATGGTTGGTCGTTTGGGTAAACTTGCTCTTTCTAGTACTGCTATTGCTATCTCTCTTTGTGCTGTTTTTGGATTCAGTCTTCTTTATGGAATGTCCTGTGCACTTGAAACTATATGTGGACAAGCTTATGGTGCAAAGCAATATAAAAGAGTTGGTGTTCAAATCTACACCGGTATCATTTCTCTTGTTCTCGCTTGTGTTCCTCTCTCTATATTATGGATCAACTTAGGGAAGCTACTGACTTTGCTTGGCCAAGACCCTTTGATTTCACAAGAAGCTGGAAAATTCGCAATATGCATGATTCCTGCATTATTTGCTTATGCAACACTTCAAGCATTGGTCAGATACTTTCTGATGCAAAGTTTGATAACTCCACTTGTTATAAGTTCTTCTGTTACACTTTGCTTCCATGTAGCTTTTTGCTGGTTGCTAGTTTTTAAATCTGGATTAGGTTGCTTAGGAGCTGCGTTTTCTATTGGTACTTCGTATTGGTTGAATGTGATTATACTTGGATTGTATATGAATTTCTCTTCTGATTGCGAAAAAACTCGGGTTCCAATTACTATGGAGTTGTTCAATGGAATAGGAGAGTTCTTTCGTTATGCTATTCCATCAGCAGGAATGATTTGCCTTGAATGGTGGTCGTTTGAGCTCCTAATCCTTCTTTCTGGTCTTCTTCCAAATCCACAGCTTGAAACTTCAGTCTTGTCGATATGTTTATCGATCATCTCAACATTATACACAATACCAGAAGCAACTGGCTCAGCTGCAAGCACTAGAGTTTCAAATGCATTAGGAGCTGGACATCCACAAGCAGCGAGATTATCTGTATATGCTTCTATGACTCTTGCTGTTTCCGAGGCAATTTTGGTTAGTTCCACCATTTTTGCCTCTCGGCGGATTGTAGGTTATATATTTAGCAATGAGCAGGATGTGGTGGATTATGTAACAGCTATGGTTCCTCTGATAAGTATAAATGTTATAGTGGATAGTTTACACGGCACACTTGCAGGTATTGCTAGAGGATCTGGTTGGCAGAAGTTGGGAGCATATGTGAATCTTGGAGCCTATTATGCTTGTGGAATTCCAATTGCTGTTATACTGGGTTTCTGGTTTGAGTTGAGAGGAAAAGGACTCTGGATTGGGATACTTGTCGGTGCCTTCTGTCAAGCACTTTTGCTATTCCTTATAACAAGTTTCACAAATTGGGAAAAACAGGCAACTAGGGCAAGGGAAAGAGTATTTGAAGGAAGTTTTGCAGAAGAAGATAGATTAGTTTTGAGCTAA 1449 0.3934 MEKGLLERDSREGESGRTITWGLFVQEVKDVGFLALPMITVTLSQYFLQIISMIMVGRLGKLALSSTAIAISLCAVFGFSLLYGMSCALETICGQAYGAKQYKRVGVQIYTGIISLVLACVPLSILWINLGKLLTLLGQDPLISQEAGKFAICMIPALFAYATLQALVRYFLMQSLITPLVISSSVTLCFHVAFCWLLVFKSGLGCLGAAFSIGTSYWLNVIILGLYMNFSSDCEKTRVPITMELFNGIGEFFRYAIPSAGMICLEWWSFELLILLSGLLPNPQLETSVLSICLSIISTLYTIPEATGSAASTRVSNALGAGHPQAARLSVYASMTLAVSEAILVSSTIFASRRIVGYIFSNEQDVVDYVTAMVPLISINVIVDSLHGTLAGIARGSGWQKLGAYVNLGAYYACGIPIAVILGFWFELRGKGLWIGILVGAFCQALLLFLITSFTNWEKQATRARERVFEGSFAEEDRLVLS 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03457 482 CDD MATE_eukaryotic 27 463 IPR045069 GO:0042910|GO:1990961
Vifa3g03457 482 NCBIfam MATE family efflux transporter 37 434 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vifa3g03457 482 PANTHER MULTIDRUG RESISTANCE PROTEIN 22 457 - -
Vifa3g03457 482 Pfam MatE 37 197 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vifa3g03457 482 Pfam MatE 258 421 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03457 Vifa-Chr3 989928792 989933106 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03457 3 989928792 989933106 Vifa3g03457 3 989928792 989933106 ECH