Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03424 ATGCCCGTGATGAAATTGATCTCCTGTTTGTTTCTATGCACGCTATCTGTTTGTTGTAATGCTACTTCGGCTTTTTCGGGTCATCGATCGATCCTTCGTGAGGTTAGCGATACTGGTCGAAGTGGAATTGATAGGGATTATGCGGTGGAGCTAAATGCGAGTAGTTTTGATGATGTTTTGAAGGATACTCCTGCTACCTTCGCCATTGTTGAATTCTTTGCACATTGGTGTCCTGCTTGCAGGAATTATAAGCCACAGTACGAAAAGGTTGCAAGGTTATTTAATGGACCTGATGCAGTGCATCCTGGAATCATATTATTGACAAGGGTGGATTGTGCAGAAAAGATAAATACTAAGCTCTGTGATAAGTTTTCTGTTGGTCATTATCCTATGCTCTTTTGGGGTGCTCCTCCTAAATTCATAGGTGGTAGTTGGGAACCGAAACAAAAGAATAGTGATATACAGGTGATTGATGATGCACGCACAGCTGATCAATTGCTTACTTGGATCAACAAACAAACGTCCAGTTCGTTTGGTCTAGATGATCAGAAGTTTCAAAACGAGCATCTTTCATCTAATGTATCAGACCCCCAACAGATTGCAAGAGGTATCTATGATGTGGAAGAGGCAACTTCATTAGCTTTTGACATCATCTTGGAGCACAAGATGATAAAACCAGAAACTCGCGGTTCACTTTTAAAGTTTCTCCAGCTTTTGACCGCTCATCATCCTTCTAGGAGATGCCGGAAGGGCGTTGGAGACTTACTTGTGAGCTTTGATGACTTATACCCAACAGAATCTTGGTCATTTCATAAACAAGAAGATGGTAAGAGTTTGATTAAGAATTTTCAGGTTTGCGGAAAAGAAGTGCCACGTGGATACTGGATGTTCTGTCGTGGTAGTAAGAATGAAACCAGAGGCTTTAGCTGTGGCTTATGGGTTCTTCTACATTCACTCTCTGTAAGGATTGAGGATGGAGAGAGTCAGTTTACATTTACTGCAATCTGTGATTTTGTTCACAACTTCTTTGTCTGTGAGGAATGCCGACAACATTTTTACAAGATGTGTTCAAGTGTGTCTAGTCCTTTCAACAAAGCCCGCGACTTTGCACTCTGGTTGTGGAGTTCCCATAACAAGGTAAACGAAAGGCTGAGGAAAGAAGAAGCTTCTCTAGGTACCGGCGATCCCAAATTCCCAAAGACAGTTTGGCCTCCAAAGCAGCTTTGCTCTTCCTGTTACCTTGACCATGACCAAACAAGCAACGAAATTGAATGGAACCAAGATGAAGTCTACAAGGCTCTGAAAAATTATTACGGAAAAACACTTGTTTCTTTGTACAAGGAGAAAGGTATTGCTGGAACCGAAGGAGATGAAGGTGTTTCCCTAGAAGATTCAACAGTCGGAACGAATGCAGTTGTGGTGCCGGTTGGAGCTGCTTTGGCAATTGCTGTTGCTAGCTGTGCCTTTGGAGCACTCGCATGCTACTGGCGTTCACAGCAAAAGAGTCGGAAGTATTTCCATCACCTACACTCTTTAAAGAACATATGA 1548 0.4244 MPVMKLISCLFLCTLSVCCNATSAFSGHRSILREVSDTGRSGIDRDYAVELNASSFDDVLKDTPATFAIVEFFAHWCPACRNYKPQYEKVARLFNGPDAVHPGIILLTRVDCAEKINTKLCDKFSVGHYPMLFWGAPPKFIGGSWEPKQKNSDIQVIDDARTADQLLTWINKQTSSSFGLDDQKFQNEHLSSNVSDPQQIARGIYDVEEATSLAFDIILEHKMIKPETRGSLLKFLQLLTAHHPSRRCRKGVGDLLVSFDDLYPTESWSFHKQEDGKSLIKNFQVCGKEVPRGYWMFCRGSKNETRGFSCGLWVLLHSLSVRIEDGESQFTFTAICDFVHNFFVCEECRQHFYKMCSSVSSPFNKARDFALWLWSSHNKVNERLRKEEASLGTGDPKFPKTVWPPKQLCSSCYLDHDQTSNEIEWNQDEVYKALKNYYGKTLVSLYKEKGIAGTEGDEGVSLEDSTVGTNAVVVPVGAALAIAVASCAFGALACYWRSQQKSRKYFHHLHSLKNI 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03424 515 ProSitePatterns Thioredoxin family active site. 69 87 IPR017937 -
Vifa3g03424 515 Gene3D ERV/ALR sulfhydryl oxidase domain 296 447 IPR036774 GO:0016972
Vifa3g03424 515 PANTHER QUIESCIN Q6-RELATED SULFHYDRYL OXIDASE 7 504 IPR039798 GO:0016971
Vifa3g03424 515 Gene3D Glutaredoxin 43 199 - -
Vifa3g03424 515 ProSiteProfiles Thioredoxin domain profile. 29 175 IPR013766 -
Vifa3g03424 515 ProSiteProfiles ERV/ALR sulfhydryl oxidase domain profile. 301 403 IPR017905 GO:0016972
Vifa3g03424 515 Pfam Erv1 / Alr family 310 404 IPR017905 GO:0016972
Vifa3g03424 515 Pfam Thioredoxin 49 133 IPR013766 -
Vifa3g03424 515 FunFam Sulfhydryl oxidase 296 447 - -
Vifa3g03424 515 FunFam Sulfhydryl oxidase 33 203 - -
Vifa3g03424 515 SUPERFAMILY Thioredoxin-like 48 174 IPR036249 -
Vifa3g03424 515 SUPERFAMILY FAD-dependent thiol oxidase 302 406 IPR036774 GO:0016972
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03424 3 984002034 984010891 Vifa3g03424 3 984002034 984010891 ECH