Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03417 ATGAAGGCTTTTTCCTTCAATGGGATGCTACTTTTTGGTTTTTTACTGTCTTTGAGCTCGGTTTCAGCTTTATCTTCATCTGGGTCGGTTAACCACCCCATCAAGTTTTTTATAGGAGGTGGAGGAGAAGTGAACTTGGGTTCATGGCAAAACAAAGCTACAGAAATGGCTCCGGCACCGGGGCCTCGAGGTGATAATACTCTTATTCTGGCGGCGAATAGGACTAAGAGGCCTGATATTCTTAGAGGATTTCATCGTTATCGCGGTGGTTGGGATATTTCGAATCGGCATTATTGGGCTTCGGTTGGCTTCACTGGTGCCACAGGTTTAGTACTTGCCATGTTATGGTTCATCTCATTTGGCTTGGCGCTTGTGATTCATCTGTGTTGTGGATGGGGGTTTAACATCAACGACAAAGAATCTAATCGTTCGCAAAGGATTTGTCTTATATTGCTTTTAGTGTTCACCTTTGCTGCGTCGACCGGATGTATCCTCCTTTCTGTTGGGCAGAATAAGTTCCACGGCGAGGCCTTGGATACCCTCCATTTTTTTGTCAATCAATCAGACTATGCGGTGCAGACTCTAAGAAATGTCACGGAGTATCTCTCCCTTGCAAAAACTATCAGTGTCAATCAGATAATTCTTCCATCCGATATCCTTGATGATATTGATAAGTTGAACGTGGATCTAAATACTGCAGCAGATGCACTTTCTGAGAAGACAAATGAAAATTCTGTTAAGATTAGAAGAGTATTCAATTATGTGCGATCAGCGTTGTTTGTTATGGCAGGAGTGATTCTTGTTTTGGCGTTAACCGGATTAGTCTTGTCGCTCCTTGGATATCAACATGCAATCCTCTTATTTGTTGTCACTGGATGGTTACTGGTTGCAACCACATTCATTCTTTGCGGAGTGTTCATGATCCTTAACAATACAATTTCTGATACATGCATGGCTATGGGAGAATGGGTAGAAAATCCACACAGAGAATCTGCTCTTAGCAACGTCCTTCCGTGTGTTGATCAGAGAACCACAAACAAAACACTTATTCAAAGCAAACAAGTTGTTACCAATATTGCAAGTATTGTCAATACGGCCATCTATACCACTGCAAACGTGAATGTAACACAAGGTCATCCGGGTTTTTACAATCAGTCTGGGCCTTTTATGCCGGTGCTATGCTATCCCTTTGACGATCAACTTCGAGAACGCCAATGTACAAATGGAGAAGTTTCTTCTGATAATGCTTCAATGGTTTGGAAGAACTATGTATGCGAGGTATCTGAATTGGGTATATGCACTACAGTTGGCAGGGTGACCCCAGAGATTTACTCACAGTTAGCAGCTGCAGCTAACGAAAGCTACGCGTTAGAACATTATGCACCACTTTTACTTAGCCTTCAGAATTGCAATTTTGTCAGGGATGCATTCACTGGAATCACTTCAAGTTACTGTCCTCCATTAATTCATTACCTTAAGGTTATTAATGTAGGACTGGGACTCATTTCAGTTGGTGTTCTGCTCTGCCTTGTTCTATGGATACTCTATGCAAACCGCCCCCAAAGGGGAGAAGTGTTTGCGACGCTAACCTTAGAAAAAATAAAGAACAAATTTAACATGAACCACAACAGCAGAGTTTTAGCATTGCCAAATGCAAATGCAAGTAGTGTAGTCTAG 1677 0.4204 MKAFSFNGMLLFGFLLSLSSVSALSSSGSVNHPIKFFIGGGGEVNLGSWQNKATEMAPAPGPRGDNTLILAANRTKRPDILRGFHRYRGGWDISNRHYWASVGFTGATGLVLAMLWFISFGLALVIHLCCGWGFNINDKESNRSQRICLILLLVFTFAASTGCILLSVGQNKFHGEALDTLHFFVNQSDYAVQTLRNVTEYLSLAKTISVNQIILPSDILDDIDKLNVDLNTAADALSEKTNENSVKIRRVFNYVRSALFVMAGVILVLALTGLVLSLLGYQHAILLFVVTGWLLVATTFILCGVFMILNNTISDTCMAMGEWVENPHRESALSNVLPCVDQRTTNKTLIQSKQVVTNIASIVNTAIYTTANVNVTQGHPGFYNQSGPFMPVLCYPFDDQLRERQCTNGEVSSDNASMVWKNYVCEVSELGICTTVGRVTPEIYSQLAAAANESYALEHYAPLLLSLQNCNFVRDAFTGITSSYCPPLIHYLKVINVGLGLISVGVLLCLVLWILYANRPQRGEVFATLTLEKIKNKFNMNHNSRVLALPNANASSVV 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03417 558 Coils Coil 551 558 - -
Vifa3g03417 558 Coils Coil 223 243 - -
Vifa3g03417 558 PANTHER TRANSMEMBRANE PROTEIN DDB_G0292058 66 533 IPR040283 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03417 Vifa-Chr3 982846520 982849976 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03417 3 982846520 982849976 Vifa3g03417 3 982846520 982849976 ECH