Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03407 ATGGGAGCTGAGAAAAAATGGCTTTTCACGCTATTTACTGCAGCGGTTTTGTCTCTGATGTTACTGTTAATGTCATCTTTTTCTACCTTCAGTTCTCAGAAGCCTTTTCCTTCCATTGTTCAACGTGGTTCTCATTACCCTCCTGCTTTTGCTTACTTTATCTCTGGTGGGCATGGTGATAAAGACCGGATCTTTCGGTTGTTGTTGGCAGTTTATCATCCGAGGAACAGGTACTTGCTTCATCTTGGGATGGATGCTAGGAAAGAGGAGAGACAGGGTTTGGCTGATGCTGTTAGTTCTGTTCCCGCGATTCGGGCTTTTGGGAATGTTGATGTTGTTGGGAAGGCGGATTGGATTACTTACTTGGGATCTTCTAATGTTGCTATCACTTTACGTGCTGCTGCCATTATGCTTAAGTTAGATAGTGGGTGGAGTTGGTTTATCACTTTGAGTGCACGGGATTATCCTCTTATTACACAGGATGATCTATCCCACGTTTTCTCCTCCGTAAATAGAGACCTCAATTTCATTGATCACACGAGTGACCTTGGATGGAAAGAGAGTGACAGATTCAAACCTATTGTTGTTGACCCGGGAACATATTTAGCAAGGAGAAGTCAAATTTTTCAAGCTACGGAGAAGAGGACAACACCTGACGCATTCAAACTCTTCACAGGTTCACCGTGGGTCACCTTGAGCCGACCTTTTCTAGAGTTCTGCATTTTTGGTTGGGATAATTTACCACGAACGTTACTGATGTATTTTACAAATGTTAAGTTATCTCAAGAAGGCTACTTTCACTCGGTTATTTGCAACGCACCAGAATTTCAGAATACAACAGTAAACGGCGACTTACGATACATGATATGGGACAATCCTCCAAAGATGGAACCTCTCTTCCTTAATACATCGGTTTATGATATGATGGCAGAAAGCGGAGCAGCTTTTGCAAGACAGTTCGAGGCCAATAACCCGGTGTTGGATATGATAGACGAAAAAATTCTCCAACGCGGTCGGAATCGAGCCGCCCCTGGGGCATGGTGCTCAGGGCGGAGAAGCTGGTGGGTGGATCCATGTTCCCAGTGGGGCGATGTCGATATTCTGAAGCCAGGTCCTCAGGCTAAGAAGCTTGAGGCGTCTGTTTCTAGTCTTCTTGATGACTGGACAGCGCAGACGAATCAGTGCCAGTGA 1191 0.4509 MGAEKKWLFTLFTAAVLSLMLLLMSSFSTFSSQKPFPSIVQRGSHYPPAFAYFISGGHGDKDRIFRLLLAVYHPRNRYLLHLGMDARKEERQGLADAVSSVPAIRAFGNVDVVGKADWITYLGSSNVAITLRAAAIMLKLDSGWSWFITLSARDYPLITQDDLSHVFSSVNRDLNFIDHTSDLGWKESDRFKPIVVDPGTYLARRSQIFQATEKRTTPDAFKLFTGSPWVTLSRPFLEFCIFGWDNLPRTLLMYFTNVKLSQEGYFHSVICNAPEFQNTTVNGDLRYMIWDNPPKMEPLFLNTSVYDMMAESGAAFARQFEANNPVLDMIDEKILQRGRNRAAPGAWCSGRRSWWVDPCSQWGDVDILKPGPQAKKLEASVSSLLDDWTAQTNQCQ 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03407 396 PANTHER GLYCOSYLTRANSFERASE 4 395 IPR044610 GO:0015020
Vifa3g03407 396 Pfam Core-2/I-Branching enzyme 50 297 IPR003406 GO:0016020|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03407 Vifa-Chr3 977665364 977668232 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g03407 1 396 Glycosyltransferase AT1G71070 69.697 0.0 580
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03407 3 977665364 977668232 Vifa3g03407 3 977665364 977668232 ECH