Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03403 ATGACTAAAGAAGAAGACTTTAAGCTACTTAAAATCCAGACTTGTGTTCTCAAAGTGAATATTCACTGTGATGGTTGTAAGCAGAAAGTGAAGAAACTCCTTCAAAGAATTGAAGGTGTTTATCAAGTTCAAATAGATGGAGAACAGCAGAAGGTAACAGTTTCAGGAAGTGTGGATGCTGAAACATTGATCAAGAAGCTTTTAAGATCTGGAAAATATGCTGAGCTTTGGTCTCAGAAAACAAACAATAATCAGAATCAAAAGCAGAAAAACAACAATGTTGTGAAAGATGACAAGAACAAAGGACAGAAACAAGTGCTGGTTAAAGGGCTTGAAGCCTTCAAAAACCAGCAGAAGTTCCCTGCTTTTATTTCTGAAGAGGGCGAAGAATACTACAACTACGGTGATGATGAAGAGGAAGAAGATGAAGAGATGCGGATCGTTAGGGAGAAAGCGAATCAAATTCATATGATCAGACAACATGCAGCTGATGCAAGTAATGTGAAGAAAGGGATTGGAGCTAAGATGAACAATGCTTGCAATGGCAATGATAATGGATGCAAGAAAGGAGGCTCGAATCAGAATATGGGAATGAAGGAAAGTGCGAACGGGGTTGATCAGAAAACAGTGGCAGCTATGAAGATGAACAATGCTCATTTGGTTGGTAATGGTGAAACCCTCCACCTCGGAGAATCCAAACGGGGTAGTGACATTGGTGCTATGATGAACTTAGCAGGTTTTAACGGTAATAATAACAACAATAACAATAACAACGGTGTTGGTAGTGCTACTACTATTCTAGGTGGAAACTCCGGGGCTATTCCAAACGGTGGTTTTGTTACTGGACAATTTCCACCAACTATGCTGATGAACATGAATGGTTTCAACAACCATTCATCTCCATTGATGAACATGAACATGCAACAAGCAAGGCATGGTATGATGATGCCACAACAACAGCCTCAAATGATGTATCACCGGTCACCTTTTGTTCCTCCTAACACTGGCTACTACTACAATTACAATAACTACATTCCTGCAAATTACTCTTATGCAAATACCAGTGAGGATCAAAACTCTGCAGCAGACATGTTCGGTGATGACAATACTACCAGCAGCTGTTCAATAATGTAA 1134 0.3977 MTKEEDFKLLKIQTCVLKVNIHCDGCKQKVKKLLQRIEGVYQVQIDGEQQKVTVSGSVDAETLIKKLLRSGKYAELWSQKTNNNQNQKQKNNNVVKDDKNKGQKQVLVKGLEAFKNQQKFPAFISEEGEEYYNYGDDEEEEDEEMRIVREKANQIHMIRQHAADASNVKKGIGAKMNNACNGNDNGCKKGGSNQNMGMKESANGVDQKTVAAMKMNNAHLVGNGETLHLGESKRGSDIGAMMNLAGFNGNNNNNNNNNGVGSATTILGGNSGAIPNGGFVTGQFPPTMLMNMNGFNNHSSPLMNMNMQQARHGMMMPQQQPQMMYHRSPFVPPNTGYYYNYNNYIPANYSYANTSEDQNSAADMFGDDNTTSSCSIM 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03403 377 ProSiteProfiles Heavy-metal-associated domain profile. 12 75 IPR006121 GO:0046872
Vifa3g03403 377 SUPERFAMILY HMA, heavy metal-associated domain 12 78 IPR036163 GO:0046872
Vifa3g03403 377 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 6 377 - -
Vifa3g03403 377 Pfam Heavy-metal-associated domain 17 69 IPR006121 GO:0046872
Vifa3g03403 377 CDD HMA 16 75 IPR006121 GO:0046872
Vifa3g03403 377 MobiDBLite consensus disorder prediction 80 101 - -
Vifa3g03403 377 Gene3D - 12 84 - -
Vifa3g03403 377 FunFam Copper transport protein ATOX1 11 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g03403 Vifa-Chr3 976555541 976557229 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03403 3 976555541 976557229 Vifa3g03403 3 976555541 976557229 ECH