Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g03401 ATGGAGAGAACACTGTTCTTGAAACTATTCACTTTTTCAGCACTTTTATTATGTTCAGTTACCTCATCATCATCGAAATCATCATCAATAGATACACTCAAACTGGTAAATGCATCCAGGCTTGAAATGTTTGTTGATAAGCTTCCCGATATGCCAAAAATCTATGGCTACGATGTTGTTGATGGCGTTCCCAAATCAAAGTCGCTCAAGATTGGCATGTTCAAGAAAAAATGGAAATTCCACAGAGATCTTCCCCCAACAACCGTTTACGCTTACGGATTAACCAAACAAAAAGCAACTATTCCTGGTCCAACAATCGAAGCCCTCCACAGAATCCCCACCCACGTGACGTGGCAAAATCACCTCCCTCCAAATCACATTCTTCCCTGGGACCCAACAATCCCCACAGCCTTAACCAAAACCACCCACGGCATCCCCACCGTGGTCCACCTCCACGGCGGAATCCACCACTCCGAAAGCGACGGAAATGCCAACTCATGGTTCACTTCCAAATTCAAAATCAAGGGACCCACTTGGACAAACAAAACATACCACTATTCAAATAATCAACACCCTGGAAATCTATGGTACCACGATCACGCTATGGGGTTGACCAGAGTCAACCTTCTCGCTGGCTTAATCGGGTCCTACATCATACGTCACCCGAAAATTGAATCTCCATTACAATTACCTCACGGTGACGAATACGATCGACCGTTGATTCTCTTCGATCGCACCTTCAAAACCGACGGTTCGATTTACATGAACTCAACCGGAAACAACCCTTCTATCCATCCACAGTGGCAACCGGAGTATTTCGGTGACGCCATTATCGTTAACGGAAAAGCTTGGCCGAGTTTAACCGTACGACGTCGTAAATACAGATTCCGTATAATCAACGCAAGCAACGCCAGATTCTTTAGATTGTTCTTCACCAACGGTTTAAGATTGGTACACGTGGCATCTGATTCTGCTTATATTACAAAACCAGCTGCAAGTAATAGAACTCTTGTGGGGCCATCTGAGATCACAGATTTTATAGTTGATTTTTCGAAATCCAAGAGTAATGTAGCTATTCTAGCTAATGATGCACCGTATCCTTACCCATCCGGTGATCCGGTTGATGAATTAACCGGTAATGTTATGAAATTTATCATCTCACCGGATAAAGAGGTTGACACGTCACGTATACCGAAGAACCTTGTGGAGTATCCGGTTGCTGATATATCCGGTGTGTCGCAGACACGGTACATTGCTATGTATGAGTATACTAGTAATATAGATGAACCCACTCATTTGTATCTGAATGGGAAACCTTATGATGCTCCAGTTACTGAAACTCCGAAGGCGGGATCCACTGAAGTTTGGTATGTGATTAACTTGACAGATGATAATCACCCGCTTCATATTCATTTGGGGTTGCTTAAGGTGTTGGATCAGACGGAGCTTGTGAAAGCTGACGAATTTAAGGATTGTATGACCAAAATTAACGATGCTGTTAAGTGCCACGTGGATAAGTATGCAAGTGGGAAGAAAGTTAAGGTGCCTAATTATGAGAAAGGGTGGAAGAATGTGTTTAAGATGAGGCCTGGGTTTGTGACTAAGATTGTTGTCAGGTTTGGTTATATTCACACCAATGCGTCGTATGAGTTTGATGCAACCGCAGGACCTGGTTACGCGTATCATTGTCATATATTGGACCATGAAGACAATGCTATGATGAGACCGTTGAAGATTATTAAGTGA 1746 0.4318 MERTLFLKLFTFSALLLCSVTSSSSKSSSIDTLKLVNASRLEMFVDKLPDMPKIYGYDVVDGVPKSKSLKIGMFKKKWKFHRDLPPTTVYAYGLTKQKATIPGPTIEALHRIPTHVTWQNHLPPNHILPWDPTIPTALTKTTHGIPTVVHLHGGIHHSESDGNANSWFTSKFKIKGPTWTNKTYHYSNNQHPGNLWYHDHAMGLTRVNLLAGLIGSYIIRHPKIESPLQLPHGDEYDRPLILFDRTFKTDGSIYMNSTGNNPSIHPQWQPEYFGDAIIVNGKAWPSLTVRRRKYRFRIINASNARFFRLFFTNGLRLVHVASDSAYITKPAASNRTLVGPSEITDFIVDFSKSKSNVAILANDAPYPYPSGDPVDELTGNVMKFIISPDKEVDTSRIPKNLVEYPVADISGVSQTRYIAMYEYTSNIDEPTHLYLNGKPYDAPVTETPKAGSTEVWYVINLTDDNHPLHIHLGLLKVLDQTELVKADEFKDCMTKINDAVKCHVDKYASGKKVKVPNYEKGWKNVFKMRPGFVTKIVVRFGYIHTNASYEFDATAGPGYAYHCHILDHEDNAMMRPLKIIK 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g03401 581 Gene3D - 39 219 IPR008972 -
Vifa3g03401 581 CDD CuRO_2_CotA_like 236 387 - -
Vifa3g03401 581 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN 11 580 IPR045087 -
Vifa3g03401 581 FunFam Spore coat protein A 40 220 - -
Vifa3g03401 581 FunFam Multi-copper oxidase type I family protein 223 402 - -
Vifa3g03401 581 Pfam Multicopper oxidase 146 222 IPR011707 GO:0005507
Vifa3g03401 581 ProSitePatterns Multicopper oxidases signature 2. 562 573 IPR002355 GO:0005507
Vifa3g03401 581 FunFam Spore coat protein A 403 581 - -
Vifa3g03401 581 Gene3D - 404 581 IPR008972 -
Vifa3g03401 581 SUPERFAMILY Cupredoxins 405 579 IPR008972 -
Vifa3g03401 581 Gene3D - 223 402 IPR008972 -
Vifa3g03401 581 SUPERFAMILY Cupredoxins 233 352 IPR008972 -
Vifa3g03401 581 Pfam Multicopper oxidase 271 362 IPR001117 -
Vifa3g03401 581 CDD CuRO_3_CotA_like 413 579 - -
Vifa3g03401 581 CDD CuRO_1_BOD_CotA_like 71 222 - -
Vifa3g03401 581 Pfam Multicopper oxidase 422 578 IPR011706 GO:0005507|GO:0016491
Vifa3g03401 581 SUPERFAMILY Cupredoxins 64 224 IPR008972 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g03401 3 975513617 975516496 Vifa3g03401 3 975513617 975516496 ECH