Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02459 ATGAAGCTTTACCAAACGGCTGTGACGAATGAGGTGGATTCGTTGGAGTACGAATTGAGTGTGGACGCGAAGATGGACTATATGGTGTGGCTGCACTTTGCTGAGATTGATACGAGTGTTAAAAGAGCTGGAGAAAGAGTTTTTGATGTGTTCATCAATGGAAAGAATGCAACTAGAGTTGATATATACAAAGAAGTGGGTAGTTTTGCGGTTTTCACTTGGCATCATGTTGTTAAAAACTTGAGCAGTAACGTTTTGGGGATTAAACTTGTTGCTGTTTCTGGTGCTCCTCTTATTAGTGGCATTGAGAATTATGCATTGGTTCCCAATGAACCTTCAACTCACCCTCTTCAAGTAAGTGCTATGGAGTCATTGAAAGAATCTCTTCGAATTCCGGGAAGAATGGGTTGGAATGGTGATCCTTGTGCTCCTACAACTTGGGATGCTTGGGAGGGTGTTACCTGCCGTATCAGTGATGATAAAACTGCTCTCATCATTACTGAAATAAATCTTGGTAGTCAAGGCTTAAAAGGGAGCATAAGTGACCAGATAAGTCATTTATCAGACTTAGTTAGCCTGAACTTGAGTTCTAATTCCTTGGGAGGCGAAATACCATCAGAACTAGGTCAAAAATCCATGGTTAAAGTGGATTTATCCAACAATCAGTTAACAGGCTCTATACCTGACAGTTTGGCATCTTCAAATTTGCTGCTTGTGCTATTGAATGATAATCTATTGGAAGGACGAGTGCCAGCGCAACTTTTTTCAGTTGGTGTGCGTGGTGGAGCTATTGATCTCTCTGGCAACAAAGGTTTGTGCAGTGTACCATCTCTACCACCATGTTGGAAGCAGGGCCGATTATCGACTGGGGCTAAAACTGCGATAGTCTTGTCATGTATTTTAGTTTTCTGCATGGTAATGCTGCTGGTGTATATCTACTGCATAAGGAAAAGGAACGATTATGACTTTAATCTACCCTATGATATAATGGCTCTAGCCGCCAAGAGAAGCAAATATCAGAGGCAGAAATCGTTGGCGCTTCTTGAGCTGGAGAATCGATATGCCAAGGGATTTCCTTCACCTTTTACTCCTCAATAG 1098 0.4189 MKLYQTAVTNEVDSLEYELSVDAKMDYMVWLHFAEIDTSVKRAGERVFDVFINGKNATRVDIYKEVGSFAVFTWHHVVKNLSSNVLGIKLVAVSGAPLISGIENYALVPNEPSTHPLQVSAMESLKESLRIPGRMGWNGDPCAPTTWDAWEGVTCRISDDKTALIITEINLGSQGLKGSISDQISHLSDLVSLNLSSNSLGGEIPSELGQKSMVKVDLSNNQLTGSIPDSLASSNLLLVLLNDNLLEGRVPAQLFSVGVRGGAIDLSGNKGLCSVPSLPPCWKQGRLSTGAKTAIVLSCILVFCMVMLLVYIYCIRKRNDYDFNLPYDIMALAAKRSKYQRQKSLALLELENRYAKGFPSPFTPQ 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02459 365 FunFam Putative LRR receptor-like serine/threonine-protein kinase 117 282 - -
Vifa3g02459 365 Gene3D - 1 106 - -
Vifa3g02459 365 Gene3D Ribonuclease Inhibitor 118 285 IPR032675 -
Vifa3g02459 365 SUPERFAMILY L domain-like 118 256 - -
Vifa3g02459 365 PANTHER OS07G0107800 PROTEIN-RELATED 2 340 - -
Vifa3g02459 365 Pfam Malectin-like domain 2 106 IPR024788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02459 Vifa-Chr3 628433853 628436162 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02459 27 318 Receptor kinase-like Gene Family AT1G51850 29.487 5.05e-26 107
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02459 3 628433853 628436162 Vifa3g02459 3 628433853 628436162 ECH