Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa3g02393 ATGGCACTCTCGCGCCTTCGCCACCCTCTCATCTCTCATTCCCTTCGTATCCTCTCTTCCTCCACCAGATCCATCTCTCGAACCCCCAATTCAAGGATTTATTCTGTTGGTGGTAATGGGAATCTAAGGCCTACATCTTGGTCTGGGATTACTGGAGTTTGTGATAGACCCTTGAAGTCTAAGTGGATTGATGTCAAATTCTTCTCGTCTTCAGATTTTCCACATGAAGTCCTTGGTATGCCAGCGTTATCTCCTACAATGACCCAAGGTAATATTGCAAAGTGGAGGAAAAAAGAAGGGGATAAGATAGCAGTGGGTGATATACTATGTGAAATTGAAACTGACAAAGCTACACTTGAATTTGAAAGTCTTGAAGAAGGATTTCTGGCTAAGATATTGGTACCTGATGGTTCAAAGGATGTGCCAGTTGGACAACCTATTGCAATAACAGTTGAGGAGGAAAGCAACATTCAAAATGTCTCAGCTTCTGTGGAGGGTGAGAGCAAGGTTGAAGAGAAGAGACCAACAAATCAGGATGTTGCGGATGAGCAAAGTAAAACAGAATCAACTTCTACAATTGATACATCAGATCTTCCACCTCATGAAATTCTCGGAATGCCTGCTTTGTCCCCAACAATGAACCAAGGAAACATTGCTAAGTGGAATAAAAAAGAAGGAGACAAGATTGAAGTGGGTGACATATTATGCGAGATAGAGACAGACAAAGCTACTCTTGAATATGAAAGTCTTGAAGAGGGGTACCTAGCTAAGATAGTTGCACCAGAAGGTACAAAAGAAGTGGCAGTCGGACAGCCTATTGCAATAACAGTTGAAGATGCGGGTGATATTGAAGCTGTAAAGAATTCTTTTAGCAGCAGCTCAATAAACCAAAAGGAGAAGGCCCCCCAACCCGGCCCTAAAAGTGAGGTCAAAACTTCCAAAAACAATACCGCACGAATCAGTCCAGCTGCGAAGTTGCTAATTACGGAATATGGATTGGATGCATCAACGTTGAAAGCAACTGGTCCTCATAGCACCCTACTGAAAAGCGATGTTCTTTCTGCAATTAAATCAGCCAAATTGTCTCCAAAACCTGCTTCATCTAAAGCAAAGGCACCATCATCTCAAAGTCATCAAGCTGCGGCTTCACAAGATTCAAAGACTGACTTAAAGCAGTCAGATGCTTATGAAGATTTTCCTAATAGTCAAATTCGCAAGGTGATTGCCAAGAGATTATTGGAATCTAAACTAAATACACCACACTTATATTTATCATCAGATGTTAAACTGGACCCTCTTCTTTCCCTTAGAAAGGATCTTATAGAGCAGTATGACGTAAAAGTTTCAGTGAATGACATTATTATCAAAGTTGTAGCGGCTGCTCTAAAAAATGTACCAGAAGCAAATGCATACTGGAGTGAAGAGAAGGGTGAAGTCATCTTATGCGATTCTGTTGACATATCAATAGCAGTTGCCACTGAAAAGGGCTTGATGACGCCAATATTAAAAAATGCCGATCATAAGACAATATCCGCCATCTCTTCTGAGGTCAAGGAACTGGCTGCAAAAGCACGTGCAGGGAAGTTGAAGCCTCAAGAGTTCCAAGGAGGTACTTTTAGCATTTCAAACTTAGGAATGTATCCCGTGGATAAATTCTGTGCAATTATAAACCCTCCACAGGCTTGCATTCTTGCTGTAGGAAGAGGCAACAAAGTTGTGGAACCAGTAATTGATGCTGATGGAATCGAGAAGCCATCAGTTGCCACTAAGTTGAACTTAACATTATCTGCGGATCATCGCGTCTTTGATGGCAAAGTTGGAGGTGCATTTCTCTCTGCTTTGAAGTCAAACTTCAGTGATATAAAACGGCTTCTTTTATAA 1881 0.4147 MALSRLRHPLISHSLRILSSSTRSISRTPNSRIYSVGGNGNLRPTSWSGITGVCDRPLKSKWIDVKFFSSSDFPHEVLGMPALSPTMTQGNIAKWRKKEGDKIAVGDILCEIETDKATLEFESLEEGFLAKILVPDGSKDVPVGQPIAITVEEESNIQNVSASVEGESKVEEKRPTNQDVADEQSKTESTSTIDTSDLPPHEILGMPALSPTMNQGNIAKWNKKEGDKIEVGDILCEIETDKATLEYESLEEGYLAKIVAPEGTKEVAVGQPIAITVEDAGDIEAVKNSFSSSSINQKEKAPQPGPKSEVKTSKNNTARISPAAKLLITEYGLDASTLKATGPHSTLLKSDVLSAIKSAKLSPKPASSKAKAPSSQSHQAAASQDSKTDLKQSDAYEDFPNSQIRKVIAKRLLESKLNTPHLYLSSDVKLDPLLSLRKDLIEQYDVKVSVNDIIIKVVAAALKNVPEANAYWSEEKGEVILCDSVDISIAVATEKGLMTPILKNADHKTISAISSEVKELAAKARAGKLKPQEFQGGTFSISNLGMYPVDKFCAIINPPQACILAVGRGNKVVEPVIDADGIEKPSVATKLNLTLSADHRVFDGKVGGAFLSALKSNFSDIKRLLL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa3g02393 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Vifa3g02393 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 197 301 - -
Vifa3g02393 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 71 175 - -
Vifa3g02393 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 380 624 - -
Vifa3g02393 626 Gene3D - 319 360 IPR036625 GO:0016746
Vifa3g02393 626 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 319 356 IPR004167 GO:0016746
Vifa3g02393 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 201 277 IPR000089 -
Vifa3g02393 626 Pfam e3 binding domain 319 353 IPR004167 GO:0016746
Vifa3g02393 626 MobiDBLite consensus disorder prediction 158 200 - -
Vifa3g02393 626 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 396 625 IPR001078 GO:0016746
Vifa3g02393 626 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 204 618 IPR006257 GO:0004742|GO:0006090|GO:0045254
Vifa3g02393 626 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 312 357 IPR036625 GO:0016746
Vifa3g02393 626 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 195 626 IPR045257 GO:0006086|GO:0045254
Vifa3g02393 626 MobiDBLite consensus disorder prediction 368 395 - -
Vifa3g02393 626 Gene3D - 380 626 IPR023213 -
Vifa3g02393 626 CDD lipoyl_domain 206 275 - -
Vifa3g02393 626 MobiDBLite consensus disorder prediction 288 316 - -
Vifa3g02393 626 SUPERFAMILY Single hybrid motif 203 292 IPR011053 -
Vifa3g02393 626 SUPERFAMILY CoA-dependent acyltransferases 390 626 - -
Vifa3g02393 626 MobiDBLite consensus disorder prediction 363 395 - -
Vifa3g02393 626 SUPERFAMILY Single hybrid motif 78 166 IPR011053 -
Vifa3g02393 626 MobiDBLite consensus disorder prediction 166 181 - -
Vifa3g02393 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Vifa3g02393 626 MobiDBLite consensus disorder prediction 182 197 - -
Vifa3g02393 626 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Vifa3g02393 626 Pfam Biotin-requiring enzyme 204 275 IPR000089 -
Vifa3g02393 626 Gene3D - 70 175 - -
Vifa3g02393 626 Gene3D - 197 302 - -
Vifa3g02393 626 CDD lipoyl_domain 80 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa3g02393 Vifa-Chr3 611455430 611467355 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa3g02393 195 626 Acyl Lipid Metabolism Gene Families AT3G13930 42.763 2.47e-109 338
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa3g02393 3 611455430 611467355 Vifa3g02393 3 611455430 611467355 ECH