Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04484 ATGGACCGAAGGTGGCCGTGGAAGAAGAAGGCGTCTGATAAGGTTGTGAATGAGAAAACAGAAGGTTTGGTAGATTCCTCGGATGTTTCCAATCAGGATAACAACAAGAAATCGAATCATGTTCAAATCTCTGTGGAATCGTATTCGAATCTGTCTGATTTGGAGGATCAAGTGAAGTTATATGAGCAAAAAGTGAAGACGTATGACGAACAAGTTCAGACATATGAGGAAAAAGTTCAGACGCTTGAAGATGAGATTAAGGAAATGAATGAAAGGCTTTCTGCGGCGAACACTGAGATTAATACTAAGGAAAGCATGGTGAAACAGCATGCTAAAGTAGCCGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCTGAGGCTTTGGCGTTGAAGGATCATCTCGAATCTGTAACTCTTTCGAAACTCACTGTCGAGGACCGTGCGTCGCATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATACGGAATCTTAAGGAAGAACATGAACAGAAAATACAGGAAGTTGCTCTGTCGAAAACCAAGCAGTTGGACAGGATTAAGGGGGAGCTAGAGGCTAATATAGCTAGTTTTGAACAGAAATTCCGGAGGTCTGTTGCAGAAAATGGAGCGCTGTCGAGATCATTGCAGGAGCGGTCTAACATGCTAATCCAAATAAGTGAAGAAAAAGCTCGTGCCGAAGCTGAAGTTGAGCAGCTTAAGAGCAACGTAGAATCATGTGAAAGAGAAATTAATTCACTTAAATATGAACTTCATGTTTCTTCCAAAGAGCTTGAGATTCGGAACGAAGAAAAAAACATGAGTATGAGGTCTGCAGAAGCGGCTAACAAGCAGCATATGGAAGGTGTAAAGAAAATTGCTAAGTTGGAAGCTGAGTGCCAAAGACTACGCGGACTAGTTCGGAAAAAGTTACCTGGTCCGGCTGCACTTGCACAAATGAAGCTTGAAGTTGAAAATCTTGGCAGAGATTACGGAGAAAGTCGATTAAGGAAATCACCTGTGAAGCCTGCTTCCCCTAATCCGTCCCCATTACCCGAATTCTCCCTAGAGAATGTTCAGAATTTTCAGAAGGAGAATGAATTTCTAACGGAGCGTTTATTTGCGATGGAAGAAGAAACAAAGATGCTGAAAGAAGCGTTGGCTAAACGGAACAGCGAATTGCAGGCCTCAAGGAGTATGTGTGCTAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAACTTCAGACAAGTAACCAGCAGAATGGATCTCTGAAATCCATCATGCATGTAACCCATGAAAGCATTTATAGTCAAAACGCAAGCATTGCACCAAGCTTGATTTCCATGTCTGAAGATGGAAATGATGATGCAGGAAGTTGCGCCGAGTCTTGGACTACAACAATAGCATCCAGGCCATCCCCCCAAGTGTCTAAAAAGTGTACCGAGGAATCAAGCAAATCCGAAGCCATTCAAAAGTTGGAACTAATGGACGATTTTCTGGAGGTGGAGAAGTTAGCTCGTCTGTCAATTGACTCCAACATAGATGCCACAGTTTCATTATCTTCAAACAATAAGGGAACTGATGGTGTGGTCAATGATATATCACAAGTCAGTACTGGCAATGTTGGCCTGTCGGAAACAAACGGCGATTCAAATTCATTGCCAAATCAAGTGTCTTCCAGTGCTTTGAAGTCAGCAACTGATCTCCAATCTGATGTTGGTAGCTTATTAACAGAGCTTAGATCGAGAATATTACTAGTTTTTGACTCCATTGCTAAGGATGCTGATATAGGAAAGATCGTTGAAGATATTAAACATGTTCTTGATGATTCACATGACACTGCCCCTTCTAAAGCCACATGTGATAGGCAGAATAATCCTGAAGATGCCGGCTTAAACCGTGAAAATGAAACCGGTTCATCTCTGCAGCCGGCAAAAGAATATGTGCAGATAACTTCAGATTTAGAAGCTGCAATTTCTCATATCCACGACTTTGTATTGTTACTAGGCAAAGAAGCGATTCCATTTCATGATGTATCTTCGGATGGAAATGAAATGAGCCAAAAGATTGAGGAGTATTCAGCCACCTTTAGTAAAGTTTTATGCAGCAGTGCAAGTATGTCGCAGTTTGTTCTTGACCTGTCTTACGTTTTGGCTAAAGCAAGTGAACTAAGATTTAGTGTCCTTGGCTACAAGGGCACAGAAGCCGAAACTAACAGTCTCGATTGCATAGATAAGATTGCATTGCCTGAAAACAAGTTAGTTCAAGAAAATTCATCTGGAGAAAGGTATCAAAATGGTTGCTCCCGTGTTCTTAATCCTGAGGTTCCAGATGATGGAAATTTAGTTTCGGGCTATAATGCGAACGTGGCATCACAAAAACTGTCATCCGAGGAATTTGAAGAATTGAAACTAGAGAAACAGAAAGTAGCAACAGATTTATCAGTATGTGCGGAGAATCTTGAAATGACCAAGTCTCAATTGCTAGAAACTGAGCAACTTCTAGCAGAAGTCAAATCACAACTAGCTTCTGCTCAAAGTTCGAATAGCTTGGCTGAGACACAGCTAAAGTGTATGACAGAGTCATACAAGTCACTTGAAACACGTGCCCAGGAGTTCGAAGCTGAACTTAACCGTTTGCAAAGTACAATAGAAACCCTGGAGAATGAGCTTCAAGATGAAAAGAGGGCTCACGAAGCTGCTTTGGCGAAGAGCAAGGAGTTCGAGGAGCAGTTACTAAGGATTGAGAGCTTAACAACTGAAAATGACATCAAGTCTACAAAGGAGAGAGATTTGGCAGCCGCGGCCGAAAAGCTAGCCGAGTGTCAAGAAACCATATTCCTTCTGGGAAAGCAGTTAAATGCTATCCATCCTCAAAGTCCAAAGGTTGAAGGCCTCAACCCAATGAATCAAACCACTTATAGTTGCCCAAGTCCTCAAGAAGTAGTTCAGTTGGAGATGGACAGTGCAACTTCTTCTTTTGTGCAAAGACTGAGTTCAGATTCTCCCTTGCATTTTTCCAATGGTTTATTTGTCCCATCAGATAACGATTCAAACGTACCGGTACCAGGACCGGCCAGATCTCCGGCACCGCTTCCAAAATCAAAACCGAAACACAGACCTACGAAATCAGCCTCTTTAACTGGTTCCGTCACTACGCCAGAGAAACACGGACGGGGATTTAGTAGATTCTTTTCATCAAAAGGGAAGCCTGGTTATTGA 3228 0.4232 MDRRWPWKKKASDKVVNEKTEGLVDSSDVSNQDNNKKSNHVQISVESYSNLSDLEDQVKLYEQKVKTYDEQVQTYEEKVQTLEDEIKEMNERLSAANTEINTKESMVKQHAKVAEEAVSGWEKAEAEALALKDHLESVTLSKLTVEDRASHLDGALKECMRQIRNLKEEHEQKIQEVALSKTKQLDRIKGELEANIASFEQKFRRSVAENGALSRSLQERSNMLIQISEEKARAEAEVEQLKSNVESCEREINSLKYELHVSSKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVENLGRDYGESRLRKSPVKPASPNPSPLPEFSLENVQNFQKENEFLTERLFAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQLQTSNQQNGSLKSIMHVTHESIYSQNASIAPSLISMSEDGNDDAGSCAESWTTTIASRPSPQVSKKCTEESSKSEAIQKLELMDDFLEVEKLARLSIDSNIDATVSLSSNNKGTDGVVNDISQVSTGNVGLSETNGDSNSLPNQVSSSALKSATDLQSDVGSLLTELRSRILLVFDSIAKDADIGKIVEDIKHVLDDSHDTAPSKATCDRQNNPEDAGLNRENETGSSLQPAKEYVQITSDLEAAISHIHDFVLLLGKEAIPFHDVSSDGNEMSQKIEEYSATFSKVLCSSASMSQFVLDLSYVLAKASELRFSVLGYKGTEAETNSLDCIDKIALPENKLVQENSSGERYQNGCSRVLNPEVPDDGNLVSGYNANVASQKLSSEEFEELKLEKQKVATDLSVCAENLEMTKSQLLETEQLLAEVKSQLASAQSSNSLAETQLKCMTESYKSLETRAQEFEAELNRLQSTIETLENELQDEKRAHEAALAKSKEFEEQLLRIESLTTENDIKSTKERDLAAAAEKLAECQETIFLLGKQLNAIHPQSPKVEGLNPMNQTTYSCPSPQEVVQLEMDSATSSFVQRLSSDSPLHFSNGLFVPSDNDSNVPVPGPARSPAPLPKSKPKHRPTKSASLTGSVTTPEKHGRGFSRFFSSKGKPGY 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 335 354 - -
Vifa2g04484 1075 Coils Coil 858 913 - -
Vifa2g04484 1075 Coils Coil 402 429 - -
Vifa2g04484 1075 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1070 - -
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 23 43 - -
Vifa2g04484 1075 Pfam Filament-like plant protein, long coiled-coil 103 962 IPR008587 -
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 1011 1075 - -
Vifa2g04484 1075 Coils Coil 217 258 - -
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 613 645 - -
Vifa2g04484 1075 Coils Coil 263 300 - -
Vifa2g04484 1075 Coils Coil 823 850 - -
Vifa2g04484 1075 Coils Coil 927 947 - -
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 1 21 - -
Vifa2g04484 1075 SUPERFAMILY Tropomyosin 800 957 - -
Vifa2g04484 1075 Gene3D - 25 121 - -
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 620 645 - -
Vifa2g04484 1075 MobiDBLite consensus disorder prediction 1 43 - -
Vifa2g04484 1075 SUPERFAMILY Tropomyosin 49 269 - -
Vifa2g04484 1075 Coils Coil 149 183 - -
Vifa2g04484 1075 Coils Coil 360 380 - -
Vifa2g04484 1075 Coils Coil 51 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04484 Vifa-Chr2 1316918747 1316922568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04484 2 1316918747 1316922568 Vifa2g04484 2 1316918747 1316922568 ECH
Vifa3g05175 3 1513317219 1513321518 Vifa2g04484 2 1316918747 1316922568 PCT