Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa2g04481 ATGGGTTCTGTTTCTTTGAAAATCGGTGATGGAACAGCAAGATTCAAAACACCAACAATCTGTTCTTCAGCACTCAACATTCTCATGATCTTGTCTGTCATCACCACCAATCTCTTCGCTCTTTACGCTTTCACTTCTTCACCAAATCTCAACCAAACCGAACAACAACTTCATCAACCACACAAAAGATTCTCTCTCATCTCAGAGCAAGTTTCGTTAATCCTCAGAGAAATCGACAAATCTCAAAAGAAACTATCCCAGATAGAAAAACAGCTTCTTGGATACGAAAGTTTCGATCTTTCAAAGCCCAACATTGCAACAGAACTCAAACTGTTCTTAACTTCTCATAAACTCCCTCTGGGTCGAGACTCCAAAACCGGACTCACTGAAATGGTTTCATCGGTTGGTCATTCATGCCAGAAAGCTTCTGATTTGTTGTCTCGTTACATGAATTACAATGTGTTTGGAAATTGTCAAGATGATTGGAGTTTAGCAGAGAAACTGATTCAAAAACAGTGTGAGCCTTTACCTAGAAGAAGATGTTTCGCACAATCGGTTTCATCTAAGGTAAAATTTCTTCATCCTTTTCCGGTTTCACTATGGAAGCCTGTTAGTAATAAAACAGTGAATTGGAATGGTTTTAACTGCAAGAGTTTCGAGTGTTTGAATGATAGGAAACTGAATAGAGATTGTGTTCATTGCTTTGATTTGGTTAATGGATATGAGAATCAAAGATTTGTTAAGTCTAAGAGTAAGAATGATTTTCTTGTTGATGATGTTTTGCAATTAGGAAATGGTGGGATTAGAATAGGTTTTGATATTGGAATTGGTTCGGGGTCTTTTGCGGCGGTTATGGCTGAGAGGAATGTTACTGTGATTACTAGTACTCTTAATGTTAATGGTCCTTTCAATGAGTTTATCGCGGCGAGAGGACTTTTTCCGGTTTACTTGAGTTTGGATCATAGGTTTCCGTTTTATGACAATGTGTTTGATTTGATTCGTGCTTCGACCAACATTGGTGATGTTGGGGAGAAACAAGAGAAGTTTGAGTTTTTGATGTTTGATATTGATAGGATCTTGAGGGCTGGTGGTTTGTTTTGGGTTGATAATTTTTATTGTGGGAGTGAAGAGAAGAAAGTTGGATTGACTAGGTTGATTGAGAGGTTTGGATATAAGAAATTGAAATGGGTTGTGGGGGAGAAGGTTGAGAGTGGTGAGGCTCATGTTTTTTTATCTGCTGTTCTTCAGAAGCCTGTTAGAGTGTGA 1266 0.3831 MGSVSLKIGDGTARFKTPTICSSALNILMILSVITTNLFALYAFTSSPNLNQTEQQLHQPHKRFSLISEQVSLILREIDKSQKKLSQIEKQLLGYESFDLSKPNIATELKLFLTSHKLPLGRDSKTGLTEMVSSVGHSCQKASDLLSRYMNYNVFGNCQDDWSLAEKLIQKQCEPLPRRRCFAQSVSSKVKFLHPFPVSLWKPVSNKTVNWNGFNCKSFECLNDRKLNRDCVHCFDLVNGYENQRFVKSKSKNDFLVDDVLQLGNGGIRIGFDIGIGSGSFAAVMAERNVTVITSTLNVNGPFNEFIAARGLFPVYLSLDHRFPFYDNVFDLIRASTNIGDVGEKQEKFEFLMFDIDRILRAGGLFWVDNFYCGSEEKKVGLTRLIERFGYKKLKWVVGEKVESGEAHVFLSAVLQKPVRV 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa2g04481 421 Coils Coil 71 91 - -
Vifa2g04481 421 Gene3D Vaccinia Virus protein VP39 238 410 IPR029063 -
Vifa2g04481 421 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 24 420 - -
Vifa2g04481 421 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 265 368 IPR004159 GO:0008168
Vifa2g04481 421 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 245 378 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa2g04481 Vifa-Chr2 1316403672 1316404937 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g04481 2 1316403672 1316404937 Vifa2g04481 2 1316403672 1316404937 ECH
Vifa3g05167 3 1508827039 1508828301 Vifa2g04481 2 1316403672 1316404937 PCT